Kordia sp. SMS9: KORDIASMS9_01863
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Entry
KORDIASMS9_01863 CDS
T05562
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03030
DNA replication
kos03430
Mismatch repair
kos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KORDIASMS9_01863 (dnaE)
03430 Mismatch repair
KORDIASMS9_01863 (dnaE)
03440 Homologous recombination
KORDIASMS9_01863 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kos03032
]
KORDIASMS9_01863 (dnaE)
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_01863 (dnaE)
Enzymes [BR:
kos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KORDIASMS9_01863 (dnaE)
DNA replication proteins [BR:
kos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KORDIASMS9_01863 (dnaE)
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KORDIASMS9_01863 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
AXG69638
UniProt:
A0A345GZA0
LinkDB
All DBs
Position
2088468..2092850
Genome browser
AA seq
1460 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPISDTDNWPRCIQIAWQLHDELGNLIEHQDYLVKPEGFNIPY
DAEKIHGISTELAAEQGFSLQEVLAKFNIALSKAKFIVGQNVGFDVNIMGAEFYRENVAN
NLQELPVLDTCTEDTASLCQLPGGRFGKFKLPTLTELHNYLFGVGFGEAHNATADVEATT
RCFLELIRRKQYTIEQLDVSPDYFERFSENNPQPIEMIGLKHINLKKASEKIRKRLEKEQ
GGSGISQQEINENLEALKNAPFSHLHNHSQFSVLQSTSSISDLVKAAGKYNMQGVAMTDH
ANMMGAFHFVKEVSNYNKGIKAKIAEAAEKGETTDAQLLKPIVGCEFFVCEDHLDKTRKD
NGYQIVLIAKNKNGYHNLAKMSSIGYTKGFYYVPRIDKKVIEQYKEDIIVLTGNLYGEVP
NKVLNIGETQAEEALLWWKETFQDDLYVEIMRHNQEDENRVNEVLVKLAKKHEIKLVATN
NTYYIAQEDATAHDVLLCVKDGEKQATPIGRGRGYRYGLPNQEYYFKSPDEMKTLFKDLP
ETILSIQEVVDKVEPFELARDVLLPAFDIPEEFQFEEDKHDGGKRGENKYLRHLTYEGAK
KRYGEITPEIEERLDFELATIENTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPMLYDLLFERFLNPDRVSMPDIDIDFDDEGRGRVMQYVIDKYGENQVAQII
TYGTMAAKSSIRDTARVLDLPLNEADRIAKLIPNTKLAKIFGKSEAELKQKFRAEEVLLI
NELVNISEEDDLAAETVNMARVLEGSVRNTGIHACGVIITPDDITKFVPVALAKDSDMYC
TQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKLVKYKHDVEIDIENIPLDDEKTYELFQR
GETVGVFQYESPGMQKHMKSLKPTTFADLIAMNALYRPGPMEYIPSFIRRKHGEEDIEYD
LDACQEYLEETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKAVLDKMKPKFIS
QASEKGHAEDKLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKTITFFMEECKRMKLEVLGPDVNESFYKFTVNDQGAVRFGMGAIKGVGHGAVKTI
VKERSEGKYKSVFDLAKRIDLRAANKKAFENLALAGGFDSFGDTHRAQYFHTENDAVTFL
EKAVKYGAKYQENKNSAQVSLFGEASEVQIAEPQVPPCEEWGTMEKLAREKEVVGIYISG
HPLDDFKAEMDYFCNGDLTCFSKMEEFVNREISFGGVVTEVQHRVSKNGKGWALFTVEDY
TNSHEFRIFGEEYLKFRHFFVPNSFVYIKAFIREGWINRDTGKRGDPRLQFNSMQLLQDV
METAARKLTIQLDVNKLKENTLDFINEILDTHKGDKSLHFTLYERNEKIKLQAPSKKKKV
NITQELLDALAEEDILYKIN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatatttgataccgaaaccacagggttgccaaaacgttgggacgcgccaatt
tctgatacagacaactggccaagatgtatccaaatcgcttggcaattgcatgacgaattg
ggaaacctcatcgaacatcaagactacttagtcaagcccgaaggttttaacattccgtac
gatgctgagaaaattcacggaatttctaccgaattggcagccgaacaaggattttcattg
caagaagtcttggcaaaattcaacattgcactgtccaaagcaaaatttattgtaggacaa
aatgtaggttttgatgtcaacattatgggtgcagaattctatcgcgaaaacgttgcaaac
aatctgcaagagttacctgtattagatacctgtacggaagatacagcgagtttatgtcaa
ttgccaggaggacgatttggtaaattcaaactacccacactaaccgaattacacaattat
ttgttcggagttggttttggagaagcacacaacgcaaccgccgatgtggaagcaaccacg
cgttgtttcttagaactcatccgaagaaaacaatatacgattgagcaattagatgtttca
ccagattattttgaacgcttttcggaaaacaatccgcagccaattgaaatgatcggattg
aagcacatcaatctcaaaaaggcttctgaaaaaatacgaaagcgactcgaaaaagagcaa
ggcggaagcggaatttcacaacaagaaataaacgaaaaccttgaagccttaaaaaatgca
ccgttttcacacttgcacaatcattcgcaattctcagtattacaatccacatctagtatt
agcgatttagtaaaagccgctggaaaatacaacatgcaaggtgtcgccatgaccgatcat
gccaacatgatgggcgcgtttcactttgtaaaggaagtgagtaattacaacaaaggcatc
aaagcaaaaattgcggaagcagccgaaaaaggagaaaccaccgatgcgcaacttctaaaa
ccaattgtaggttgtgaattctttgtgtgtgaagatcatttagataaaacccgaaaagac
aacggatatcaaattgtactcatcgccaaaaacaaaaacggctatcacaatttggcaaaa
atgtcttccatcggatacacaaaaggattttactacgtaccgcgaattgacaaaaaagtc
attgaacagtacaaagaagatattattgtattgacgggaaatttgtatggtgaagtgcca
aacaaagtattaaacataggagaaacacaagcggaagaagcattgctttggtggaaagaa
acctttcaagacgacttgtatgtcgaaatcatgcgtcacaatcaagaagatgaaaatcgt
gtgaatgaagtattggtcaaattggctaaaaagcatgaaatcaaactggtggctaccaat
aatacgtattacattgctcaagaagatgccactgcgcatgatgttttactatgtgtgaaa
gatggcgaaaaacaagccacacccataggtcgcggacgtggttatcgctatggattgcca
aatcaagaatactatttcaagtcgccagacgagatgaaaaccttgtttaaagatttgcca
gaaaccatactttccatacaagaagttgtcgacaaggtagaaccatttgagttagctcgt
gatgtattattacctgcattcgacattccagaagaattccagtttgaagaagacaaacac
gacggtggaaaacgcggagaaaacaaatacttacgacacttaacgtacgaaggtgcgaaa
aaaagatatggcgaaattacaccagaaattgaagaacgactcgattttgaacttgcaacc
attgaaaatacaggatatccagggtatttcttaattgtagaagattttatccgcgaagcg
cgaaacatggacgtttcggttggtccaggtcgtggatcggcagcaggttcggtagttgcc
tactgtttgtggattacaaatattgatccgatgttgtacgatctgctttttgagcgtttc
ttaaatccggatcgtgtgtccatgcccgatattgatattgactttgatgatgaaggtcgc
ggtcgcgtaatgcaatacgtaattgataaatatggagaaaatcaagtagcacaaatcatt
acgtacggaaccatggcagcaaaatcgtccattcgtgataccgcacgtgtgttagatttg
ccactgaacgaagcagaccgaatcgccaaattgattccaaatacgaaactggcaaagatt
tttggaaaatcggaagcagaactcaaacaaaaatttagagctgaagaagttctactcatc
aatgaattggtgaatatttcggaagaagatgatttggctgcggaaactgtgaacatggca
cgcgtgttagaaggttcagtccgtaatacgggaattcacgcgtgtggcgtcatcattaca
cccgatgatattacgaagttcgttccggtcgcgttggcgaaagattcagacatgtactgt
acacaatttgataactcggtggtggaagatgcaggtctgctaaaaatggactttttagga
ctgaaaacgctgacgctgatcaaagatacggtcaagcttgttaagtacaaacacgatgtt
gagattgacattgagaacattccgcttgacgacgaaaaaacatacgagttattccaacga
ggagaaacggtaggcgtgtttcagtacgaatcgcccggaatgcaaaagcacatgaaatcg
ctcaaaccgacaacgtttgccgatctcattgcaatgaatgccttgtatcgtccgggaccg
atggaatacattccgagttttattcgcagaaaacacggagaagaagatattgagtacgat
ttagatgcgtgtcaagaatacttagaagaaacctacggaattacagtctatcaagagcaa
gtgatgttgctgtcgcagaaattggccgattttaccaaaggtgaagccgatgtcttgcgt
aaagcgatggggaaaaagcaaaaagccgtactggataaaatgaagcctaagtttatctcg
caagcttctgaaaaaggacatgccgaagacaaactagagaaaatttggaaagattgggaa
gcatttgcagcgtatgccttcaacaaatcgcattctacttgttacgcttggattgcctat
caaacggcgtatttaaaagcacattatcctgcggaatacatggcggcggtactttccaac
aacatgaatgatattaaaacgattaccttctttatggaagaatgtaaacgtatgaaattg
gaagttttaggtcctgatgtgaatgaatcgttctataaatttacggtaaacgaccaaggt
gcggtgcgttttggaatgggcgcaatcaaaggtgtgggacatggtgctgtaaaaaccatc
gtgaaagaacgttcggaaggaaaatacaaatcggtatttgatctggcaaaacgaatagat
ttgcgcgcagccaataaaaaagcttttgaaaacttagccttagcgggcggatttgactcg
tttggcgatacacacagagcgcaatatttccatacagaaaatgatgcggttactttttta
gaaaaagccgtgaaatacggtgcaaaatatcaagaaaataaaaactctgcacaagtaagt
ttgtttggtgaagccagcgaagtgcaaattgctgagccacaagtgccgccatgtgaagaa
tggggaacgatggagaaactagcgcgtgaaaaagaagtggtaggaatttatatttcggga
catccgttggacgattttaaagcggaaatggactatttctgtaatggcgatttaacctgt
ttttctaaaatggaagaatttgtgaatcgtgaaatttcttttggtggcgttgtgacagaa
gtgcaacaccgagtttccaaaaacggaaaaggttgggcattatttacggtggaagattat
acaaattcgcatgaatttagaatctttggagaagaatatttaaagtttcgtcatttcttt
gtgccgaattcattcgtctatatcaaagcgttcattcgagaaggttggatcaatcgtgat
acaggaaaacgtggcgatccaagattgcaattcaattcgatgcaattgttgcaagatgtg
atggaaactgcggcaagaaagcttacgattcaactagatgtaaataaactaaaagaaaac
acactcgattttatcaacgaaattttagacacacacaaaggcgataaatcattacatttt
accttatacgagcgtaatgaaaaaataaaattacaagcacccagcaaaaagaaaaaagta
aatattacgcaggaattattggatgcgttggcagaagaagatattttgtataaaattaac
tga
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