Kordia sp. SMS9: KORDIASMS9_02311
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Entry
KORDIASMS9_02311 CDS
T05562
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00470
D-Amino acid metabolism
kos00550
Peptidoglycan biosynthesis
kos01100
Metabolic pathways
kos01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KORDIASMS9_02311 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KORDIASMS9_02311 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
KORDIASMS9_02311 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kos01011
]
KORDIASMS9_02311 (ddl)
Enzymes [BR:
kos01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
KORDIASMS9_02311 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
kos01011
]
Precursor biosynthesis
Amino acid ligase
KORDIASMS9_02311 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_3
CPSase_L_D2
ATP-grasp_4
GARS_A
Motif
Other DBs
NCBI-ProteinID:
AXG70082
LinkDB
All DBs
Position
complement(2581031..2581987)
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AA seq
318 aa
AA seq
DB search
MGGYSSEYAISLKTGSVVYKHLDSTKYNAYKVHIFRNKWVCVTEDAQEFPIDKNDFSVTI
DGVKITFDCVFNAIHGTPGEDGYMQGYLELLGIPHTSCGMYQAALTFNKRDLLSTLKPYG
IKCATSYYLNAGDAVNEQAIVAKVGLPCFVKANKAGSSFGVSKVHKIDELQNAIEVALKE
DDEVIIESFLDGVEVSVGVIKYQGNVTVLPITEIVSENDFFDYEAKYLGQSQEITPARIS
EELTEKVSKAAKNIYEILKMEGFSRSEFIFKDDEPYLLEVNTVPGMTEESILPQQAKEAG
ISLEALFGNAVALALAKK
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgggcggttattctagtgaatacgccatttcgttgaaaacaggaagtgttgtgtacaaa
catttagattccactaaatacaacgcgtataaagtgcatatttttcgcaataagtgggtt
tgtgttaccgaagatgcacaagagtttcctattgacaaaaacgatttttccgtgacaatt
gatggtgtcaaaattacatttgattgtgtatttaatgccattcatggaacacctggagaa
gatggttatatgcaaggatatttggaacttttaggcattccacatacaagttgtggcatg
tatcaagcagccttaacttttaataaacgtgatttgttatctacattgaaaccttacgga
attaaatgtgcaacttcttattatttgaatgctggcgatgctgtaaacgaacaagcaatt
gtagcaaaagtaggattgccgtgttttgtaaaagccaacaaagctggaagcagttttgga
gtttccaaagtgcataaaattgacgaactacaaaatgctattgaagttgcgcttaaagaa
gacgacgaagtaattattgaatcgtttttggatggtgtagaagtttcggttggcgttatt
aagtatcaaggaaacgttacggtattgccaattacagaaattgtgtcagaaaatgatttt
tttgattacgaagcgaagtatttaggacaatcacaagaaattacacctgcgcgaatttca
gaggaacttacagagaaagtgtctaaagctgccaagaatatttatgaaattttaaagatg
gaaggcttttcgcgaagtgaatttatttttaaggatgacgaaccgtatttgttagaagtc
aatacagttcctggcatgaccgaagaaagtattttaccacaacaagcaaaagaagctgga
atttccttagaagccttatttggcaatgctgttgctttagctttggctaaaaagtag
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