Kordia sp. SMS9: KORDIASMS9_02538
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Entry
KORDIASMS9_02538 CDS
T05562
Symbol
cca
Name
(GenBank) multifunctional CCA protein
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
kos
Kordia sp. SMS9
Pathway
kos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KORDIASMS9_02538 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kos03016
]
KORDIASMS9_02538 (cca)
Enzymes [BR:
kos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
KORDIASMS9_02538 (cca)
Transfer RNA biogenesis [BR:
kos03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
KORDIASMS9_02538 (cca)
Prokaryotic type
KORDIASMS9_02538 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
MIOX
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
AXG70299
UniProt:
A0A345H161
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All DBs
Position
complement(2861896..2863320)
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AA seq
474 aa
AA seq
DB search
MNYKEALQLNIFSTISKAASELQLETYVIGGFVRDFLLKRGDAKDIDVVAVGSGIELAKK
VASLLPNKPKVQVFKNYGTAMIKTKEIEVEFVGARKESYERGSRNPAVENGTLQDDQDRR
DFTINAMALSLNEDTFGDLLDPFNGLQDLADKRIVTPLDPDITYSDDPLRMMRAVRFATQ
LHFTIDPVSLEAITRNADRIKIISKERIVVELNKILMSNQPSIGFILLEKTKLLPYILPE
LVALKGIDEKEGQRHKDNFYHTLEVVDNICPNTDNVWLRWAALLHDIGKAPTKKFTKKAG
WTFHGHEFIGGKMVYKLFKRLHMPLNDKMKFVQKMVTMSSRPIVLSQDGVTDSAVRRLVF
DASDYVDDLMTLCEADITTKNPKKFERYHNNFKMVREKIVEVEERDHVRNFQPPVSGEEI
MQTFNLKPSREIGIIKHAIKEAILEGEIPNEYEAAHAYMITKGKELGLVENTER
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaaagaagccttacaactcaacatattttcaaccatttccaaagcagctagt
gaattacaattagaaacctatgtaattggcggttttgtgcgcgattttctattgaaacgt
ggcgatgcaaaagatattgacgtagtcgctgtaggcagcggaatcgaactcgcaaaaaaa
gtagcttcactcttaccaaacaaaccgaaagtgcaagtgtttaaaaattatggtactgcc
atgattaaaaccaaagaaattgaagtcgaatttgtaggcgcacgcaaagaaagttacgaa
cgcggcagtagaaatcctgcggtagaaaacggaacattgcaagacgatcaagatcgacgt
gattttacgatcaatgccatggcactgagtttgaacgaagatacgtttggcgatttgctc
gatccattcaatggtctacaagatttggcagataaacgaattgtaacgccgctcgatccc
gatattacctattcggacgatccgttgcgtatgatgcgcgcagtgcgatttgcaacgcaa
ttacattttaccattgatccagtttcactcgaagcaattacacgaaatgcggatcgtatc
aagattatttcaaaagaacgtattgtcgtagaattgaataaaattctgatgagcaaccaa
ccttctataggttttattttgttagaaaaaacaaagcttttaccctacattcttccagaa
ttagttgcactaaaaggaattgacgaaaaagaaggacaacgacataaagacaatttttat
cacacgttagaagttgtggataatatctgtccaaatacggacaatgtttggttgcgttgg
gcagcgttgttgcacgatattggaaaagctccgaccaaaaagtttaccaaaaaagcgggt
tggacatttcacggacacgaatttatcggtggaaaaatggtgtacaaactcttcaagcgt
ttgcacatgccattgaatgataaaatgaaatttgttcaaaaaatggtcacgatgagttcg
cgaccaattgtactatcacaagatggtgtgaccgattctgccgtacgacgtttggtattt
gatgcaagcgattatgtagatgatttaatgacattgtgcgaagcagacatcaccacgaaa
aacccaaaaaaattcgaaagatatcacaacaactttaaaatggttcgtgaaaaaatcgtg
gaagttgaagaacgtgatcatgtgcgtaattttcagccaccagtttcgggtgaagaaatc
atgcagacttttaacttgaagccttcccgagaaatcggaatcataaaacacgccattaaa
gaagcaattttagaaggcgaaattcccaacgaatacgaagcggcacacgcatatatgatt
accaaaggaaaagaattaggactcgtagaaaatacagaaagataa
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