Kordia sp. SMS9: KORDIASMS9_02642
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Entry
KORDIASMS9_02642 CDS
T05562
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00541
Biosynthesis of various nucleotide sugars
kos01100
Metabolic pathways
kos01250
Biosynthesis of nucleotide sugars
Module
kos_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KORDIASMS9_02642 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kos01005
]
KORDIASMS9_02642 (kdsB)
Enzymes [BR:
kos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
KORDIASMS9_02642 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
kos01005
]
Lipid A
KORDIASMS9_02642 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
IspD
Glyco_hydro_35
ADH_zinc_N
Motif
Other DBs
NCBI-ProteinID:
AXG70402
UniProt:
A0A345H1G4
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Position
complement(2963105..2963821)
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AA seq
238 aa
AA seq
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MIPARYAASRFPGKLMQDLHGKTVITRTYEATVATGLFEEVYVVTDSDVIREEISKNGGN
VIMSQKEHESGSDRIAEAVEDVEADIVINVQGDEPFTEKASLEKVINVFYEDPQKEIDLA
SLMVEITDWDEISNPNTVKVIVDQRSFALYFSRSPIPFPRDKNAGAKYYKHKGIYAFRKQ
ALLDFAKLPMQMLEATEKIECIRYLEFGKKIKMVTTTVEGVEIDTPEDLERAKKVWNS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgattcccgcacgatatgcagcttctcgatttccagggaagctcatgcaagatttacac
ggtaaaacggtaattacccgaacgtacgaagctacggttgctacaggtctttttgaagaa
gtctatgtagtgacggacagcgatgtgattcgcgaagaaattagcaaaaatggcggaaat
gtcatcatgagtcaaaaggaacacgaatctggaagcgatcgcattgcagaagccgtagaa
gacgtggaagccgatattgtaatcaatgtgcaaggtgacgaaccgttcacggaaaaagcc
agtttagaaaaggtaatcaacgttttttatgaagatccgcaaaaagaaattgatctcgct
tcattgatggtagaaattacggattgggacgaaattagcaatcctaacacggtaaaagtc
attgtagatcagcgcagttttgcactctatttttcacgatcgccaattccatttccaaga
gataaaaatgcaggtgccaaatattacaaacacaaaggaatttatgcatttcgcaagcaa
gccttgttagattttgccaaattacctatgcaaatgcttgaagccactgaaaaaattgag
tgtattcgctatttagaatttgggaagaaaataaaaatggtgacgaccactgtagaaggt
gttgaaattgatacgccagaagatttagaacgcgccaaaaaagtatggaactcatga
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