Kordia sp. SMS9: KORDIASMS9_02838
Help
Entry
KORDIASMS9_02838 CDS
T05562
Name
(GenBank) viral (superfamily 1) RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03420
Nucleotide excision repair
kos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KORDIASMS9_02838
03430 Mismatch repair
KORDIASMS9_02838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_02838
Enzymes [BR:
kos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KORDIASMS9_02838
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KORDIASMS9_02838
MMR (mismatch excision repair)
Other MMR factors
KORDIASMS9_02838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Viral_helicase1
UvrD-helicase
AAA_19
UvrD_C_2
vWF_A
Motif
Other DBs
NCBI-ProteinID:
AXG70598
UniProt:
A0A345H210
LinkDB
All DBs
Position
3148311..3149333
Genome browser
AA seq
340 aa
AA seq
DB search
MVDKKLILAVAGSGKTTNLIDKLNLDKRFYLVTYTITSASLIRYRIIKKFGYLPNNIQVF
TYFNFLYNFCVKPFLFFKYNLKGIYLENPPEQTNYFKNSDIRKYMSKNGYVYHNRLAKLI
EFENLIEDVKLRLEKFCDYFYYDEVQDLGSHDFNFIMELSKSNLNFLFVGDFYQHTYVTS
FDRNVNVNLHKDFYKYLKRFEAYDIKIDLKTLSNSWRCSPTICNYITDNLDINIGSHRTD
QTKITLIEDKQKLIPILNNNNIIKLVYNNANKRDFKAKNWGECKGEDDFIDTCIIMNTTT
YNLYKKDNLKKLAKRTKNKLYVALSRTRGNCYLVNEKLLK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggttgataaaaaattaatattagcagttgcaggctcaggtaaaacaaccaatttaatt
gataaattaaatttagataaacgattttatttagttacttatacaataaccagcgcgagt
ttgattcggtatcggattattaaaaaatttggttatttaccaaataacatacaagtattt
acttatttcaactttttgtacaacttttgtgtaaaaccgtttttattcttcaaatataat
ctcaaaggaatatatcttgagaatccccccgaacaaactaattacttcaaaaattcagat
ataagaaaatatatgagtaaaaatggctatgtctatcataatagactagctaagctaatt
gaatttgagaatttaatagaagatgttaaattaaggttagaaaagttctgtgattatttc
tactatgatgaagtacaagatttagggagtcacgatttcaattttataatggagctttca
aagtccaatcttaattttctttttgttggagatttttatcagcatacatatgtaacaagc
ttcgatagaaatgtgaatgtaaatttacacaaggatttttataaatatttaaaaaggttt
gaggcttatgatatcaaaattgatttaaaaacattaagcaatagctggagatgtagcccc
acaatatgtaattatataactgataatttagatattaatattggctctcatagaactgat
caaacaaaaattacattaattgaagataaacaaaaattgattccaattttaaataataat
aacataataaagttagtttataacaatgcgaataaaagggattttaaagcaaaaaattgg
ggtgaatgcaagggtgaagatgattttatcgacacctgtataataatgaataccactaca
tacaatttatataaaaaagataacttaaagaagttggctaagagaactaaaaacaaactt
tatgtagctctatcaagaacccgtggtaattgttatttagttaatgaaaaactattgaaa
tag
DBGET
integrated database retrieval system
