Kordia sp. SMS9: KORDIASMS9_02921
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Entry
KORDIASMS9_02921 CDS
T05562
Symbol
xynC
Name
(GenBank) glucuronoxylanase XynC
KO
K01201
glucosylceramidase [EC:
3.2.1.45
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00511
Other glycan degradation
kos00600
Sphingolipid metabolism
kos01100
Metabolic pathways
kos04142
Lysosome
kos04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
KORDIASMS9_02921 (xynC)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
KORDIASMS9_02921 (xynC)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
KORDIASMS9_02921 (xynC)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
KORDIASMS9_02921 (xynC)
Enzymes [BR:
kos01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.45 glucosylceramidase
KORDIASMS9_02921 (xynC)
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Motif
Pfam:
Glyco_hydro_30
Glyco_hydro_30C
DUF3572
Motif
Other DBs
NCBI-ProteinID:
AXG70677
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Position
3242785..3244269
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AA seq
494 aa
AA seq
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MNIKNTIIVVAALLLASCASDVSEPKKKEPSATKTSKNPVFTPTKAVVYTTAEKSTLRLA
NQGEFSFTNTKQPLETEVAVFVNPAKQFQTFLGIGGAITDASAEVFSKLPKDKQEELLNA
YYSENGINYNIIRTSIHSSDFGLGSFTYIKEKDETLETFSIAKDKEKRIPMIKRATALIK
DDLVFYASPWSPPAFMKTNNHMLKGGKLLPKYYQTWADYFVKFIKAYEAEGIPVWGVTIQ
NEPMATQRWESCIYSAEEERDFLKNNLGPTFEKNGFGDKNIVVWDHNRDLISHRANTIFE
DAEAAKYAWGIGFHWYETWTGGAPKYENLGNINASFPTKNLLFTEGCQEKFDEKAYQRWS
NAERYGNSMINDFNNGTVGWTDWNILLDHTGGPNHVQNFCFAPIHADTRTNELIYTPSYY
YIGHFSKFIQPNAKRVSTTTSRSTLESTSFQNTDGSIITVVMNKTDQKINYKLIVGDQEL
KLSIDAHAIQSLIY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaaaatacgataattgtcgtagcagcattgctactggcttcatgcgctagt
gacgtatctgaacctaaaaaaaaggaaccatcagcaacaaaaacttccaaaaatcctgta
tttacacccacaaaagcagtagtgtatacaaccgctgaaaaatcaacattgcgcttggca
aatcaaggggaatttagttttactaatacgaagcaaccactagaaacagaagttgccgtt
tttgtaaatcctgcaaagcagtttcaaacctttttgggaattggtggcgctattacagac
gcttctgcggaagtgttttccaaactaccaaaagacaaacaagaagaactcttaaacgca
tactattccgaaaacggcatcaattacaacatcattagaacgagtattcacagcagtgat
tttggtttgggaagttttacctatatcaaagaaaaagacgaaacgcttgaaacgttttcc
attgcaaaagacaaagaaaagcgcattccgatgattaaaagagccacggcacttattaaa
gacgatttggttttttatgcaagtccgtggagtccgccagcatttatgaaaaccaacaat
cacatgctaaaaggagggaagttattgccaaaatactatcaaacgtgggcagattatttt
gtgaaattcatcaaagcgtatgaagcggaaggcatcccagtttggggcgttaccatccaa
aatgaaccgatggcaacacaacgttgggaatcgtgtatttattcagcagaagaagaacgc
gactttctaaaaaacaacttaggacctacatttgaaaaaaatggttttggcgataaaaat
attgtggtttgggatcataaccgagatttaatttcgcacagagccaatactatttttgaa
gatgctgaagctgcaaaatacgcttggggaattggttttcactggtacgaaacgtggaca
ggcggcgcaccaaaatatgaaaacttaggaaatatcaacgcttcttttcctaccaaaaat
ttactctttacagaaggttgtcaagaaaaatttgacgaaaaggcataccaacgttggtca
aatgcagaacggtatggaaactctatgatcaacgattttaacaacggaactgtcggttgg
accgattggaatattttgttagatcatacaggcggaccaaatcatgtgcagaacttttgc
tttgcgccaattcacgccgatacgcgaaccaacgaactcatttacacaccttcgtattac
tatattggacatttttcaaaattcatccaaccaaatgcaaaacgagttagtacaaccacg
agtagaagtacgttggaaagtacctcatttcaaaatacagacggaagcatcataactgtt
gtgatgaataaaaccgatcaaaaaatcaattataaactcattgtaggcgatcaagagctg
aaactttctattgatgcgcatgccattcaatctttaatctattaa
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