Kordia sp. SMS9: KORDIASMS9_03164
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Entry
KORDIASMS9_03164 CDS
T05562
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00300
Lysine biosynthesis
kos00470
D-Amino acid metabolism
kos01100
Metabolic pathways
kos01110
Biosynthesis of secondary metabolites
kos01120
Microbial metabolism in diverse environments
kos01230
Biosynthesis of amino acids
Module
kos_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KORDIASMS9_03164 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KORDIASMS9_03164 (dapF)
Enzymes [BR:
kos01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KORDIASMS9_03164 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
CntK_N
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AXG70909
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Position
3636224..3637003
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AA seq
259 aa
AA seq
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MILSFYKYQGTGNDFVLIDNRQQVFSKNDTKLVHFLCDRKFGIGADGLILLENDDVYDFK
MVYYNSDGNESTMCGNGGRCMVAFANFLGVIKDETTFIAIDGKHYATIEGEEVHLQMQDV
STIEDHETHVFLNTGSPHHVTFSENISQLDIKREGAAIRYGAPYFEEGANVNFVKKLSDT
EFRVRTYERGVEDETLSCGTGVTAVALAMHHLQETKANEVTLQVEGGHLQVSFERDAKTY
TNIFLKGKATQVFKGEITC
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgatactctctttttacaaataccaaggaacaggcaacgattttgtgctcattgacaat
cgacagcaagtattttccaaaaatgataccaaactcgttcactttttgtgcgaccgaaaa
tttggcattggagcggacggtttgattcttttagaaaatgacgatgtgtacgattttaaa
atggtgtattacaactctgatggaaatgaaagtacgatgtgtggaaatggtggcagatgt
atggtagctttcgcgaattttctcggagttattaaagacgaaactacttttattgccata
gatgggaaacattacgcaacaattgaaggtgaggaagtgcatttgcaaatgcaagatgtt
tccacaattgaagatcatgaaacgcatgtatttttaaatacaggttcaccacatcatgtc
actttttcagaaaatataagtcaacttgacatcaaaagagaaggagcagcgattcggtat
ggtgcgccatattttgaagaaggagccaacgtaaactttgtaaaaaagctttcggatact
gaattcagagtgcgaacctatgaaagaggcgtggaagacgaaacactttcgtgtggaact
ggcgttacagcagtcgcactggcaatgcatcacttgcaagaaaccaaggcgaacgaagtc
acattgcaagtagaaggtggacatttacaagtatcttttgagcgcgacgccaaaacctat
acaaacatcttcctcaaaggaaaagcaactcaagtatttaaaggagaaataacatgctaa
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