Kordia sp. SMS9: KORDIASMS9_03294
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Entry
KORDIASMS9_03294 CDS
T05562
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03420
Nucleotide excision repair
kos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KORDIASMS9_03294 (pcrA)
03430 Mismatch repair
KORDIASMS9_03294 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_03294 (pcrA)
Enzymes [BR:
kos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KORDIASMS9_03294 (pcrA)
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KORDIASMS9_03294 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
KORDIASMS9_03294 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AXG71039
UniProt:
A0A345H3A1
LinkDB
All DBs
Position
3774887..3777247
Genome browser
AA seq
786 aa
AA seq
DB search
MLFLELIMEQDIQHYIAQLNDAQRAPTVHKDGALMVIAGAGSGKTRVLTYRIAYLMSQGV
DSFNILALTFTNKAAREMKARIARIVGGSEAKNLWMGTFHSIFAKILRFEADKLGYPSNF
TIYDTQDSERLIRAIIKEMQLDKDIYKYKQIRSRISSFKNSLITVRAYFNDPDLVEADAM
AKRPRMGEIYKEYVDRCFKAGAMDFDDLLLRTNELLNRFPEVLLKYQTRFRYILVDEYQD
TNHSQYLIVKALADRFQNICVVGDDSQSIYAFRGANINNILNFQKDYDNVEMYRLEQNYR
STKNIVEAANSVIEHNKTRLDKVVWTANESGPKIKVNRSVTDGEEGRFVASSIFETKMRE
QVTNGDFAILYRTNAQSRAMEDALRKRDIPYRIYGGLSFYQRKEIKDVLAYLRLIVNPKD
EESLKRVINYPARGIGQTTIDKLVVAAKHYGRSMFEVMENISKIDLKINKGTKTKLENFV
TMIRSFQIMNEGSNAFELTSHITKKTGLVQELKKDGTPEGIARIENIEELLNGIKDFVEG
QVEVADATGALAEFLEDVALATDMDNDKGDDDRVALMTIHLAKGLEFPYVYIVGMEEDLF
PSGMSMNTRSELEEERRLFYVALTRAEKQAYLTYTLSRYRWGKLVDAEPSRFIEEIDDQY
LDYITPVDNYRFKPLIDNDIFGEVDKSKLRLQKPKSGRPPVVGSPTPEQIRKLRKIKPET
SQSSPPSGSLLDEKLVPGTLVEHTRFGRGEIIRLEGVGGDKKAEIKFQVGGIKKLLLRFA
KLEIVK
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttggagttaattatggagcaagacattcaacactatattgcgcagctaaat
gacgcacaacgcgcaccaaccgttcacaaagatggagcattgatggtgatcgcaggcgca
ggttctggaaaaacacgagtacttacgtatcgcattgcgtatttaatgagtcaaggcgta
gattcctttaatattttagcattgacatttaccaacaaagccgcacgtgaaatgaaagca
cgtattgcacgaattgtgggtggaagtgaagcaaaaaacttgtggatgggaacattccat
tcaatctttgcaaaaattttacgctttgaagcggataaattaggctatcctagtaacttt
acgatctacgatacacaggattctgaacgtttaattcgcgctatcatcaaggaaatgcag
ctagataaagatatctacaaatacaaacaaatacgttcgcgaatttcctcttttaaaaac
agtctcattacggtgagagcgtatttcaacgatcccgatttggtagaagcagatgccatg
gcaaaacgtccgcgcatgggcgaaatttacaaagaatatgtagatcgctgttttaaagct
ggcgcgatggattttgacgatttattattaagaacgaatgaattattgaatcgctttcca
gaagtactattaaaataccaaacgcgtttccgctacattttggtggatgagtaccaagat
accaaccattctcaatatttgatcgtaaaagccttggcagatcgttttcagaatatatgt
gtcgtgggcgatgattcacaaagtatctatgcgtttcgtggtgcgaatatcaacaatatt
ttaaactttcagaaagattatgacaatgttgaaatgtaccgtttggagcagaattatcgt
tcgaccaaaaacattgtagaagcagcaaattcagtcatagaacacaacaaaacacgtttg
gataaagtggtttggaccgccaatgaatctggaccgaaaataaaagtcaatcgcagtgtg
acagatggagaagaaggtcgttttgtagcgagttccatttttgaaactaagatgcgtgag
caagtgaccaatggcgattttgcgattttataccgtaccaatgcacaatcacgcgccatg
gaagatgcgttgcgaaagcgtgacattccgtatcgtatctacggtggtttatccttctat
caaagaaaagaaatcaaagatgtattggcgtatttgcgattaatcgtgaatccgaaagat
gaagaaagtttaaaacgtgtcatcaattatcctgcacgtggcattgggcaaacaacgatt
gataaattagttgttgctgccaaacattacgggcgttccatgtttgaagtgatggaaaat
atttccaaaattgatctaaaaatcaacaaaggcacgaaaactaaactggaaaactttgtg
acgatgatccgaagttttcaaatcatgaatgaaggctcgaatgcgttcgaattgacatcg
cacattaccaaaaaaacgggcttagttcaagaattgaaaaaagacggaacgccagaaggg
attgcgcgtattgaaaatatagaagaattgctgaacggaattaaagattttgtggaagga
caagtggaagtggctgatgctacaggcgcgttggcagaattcttggaagatgtggcattg
gctaccgatatggacaacgacaaaggtgatgacgatagagtagctttgatgacgatccac
ttggcaaaaggactggaatttccgtatgtctatattgtgggaatggaagaagatttgttc
ccatcagggatgagtatgaacacgcgaagcgaactggaagaagaacgccgtttgttttat
gtagcgttgaccagagccgaaaaacaagcctatttaacctatacattaagtcgttaccga
tggggaaaattggtcgatgcagaaccaagtcgcttcatagaagaaattgacgatcaatac
ttggattacatcacgcccgtagacaattatcgtttcaaaccgttgattgacaatgatatt
tttggcgaagtggataaaagcaaattacgcttgcaaaaaccaaaatcgggacgtccgcca
gtggtgggaagtcccacaccagaacaaatacgcaaactgcgaaaaataaagccagaaacc
tcacagagcagtccgccaagcggcagtttgttagatgaaaaacttgtgccaggaacctta
gtagaacatacgcgttttggtcggggagaaataatacgattagaaggtgttggtggcgat
aaaaaagcggaaatcaaatttcaagttggaggcattaagaagttgttgttgcgttttgcg
aaattggaaattgtgaagtag
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