Kordia sp. SMS9: KORDIASMS9_03305
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Entry
KORDIASMS9_03305 CDS
T05562
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03030
DNA replication
kos03430
Mismatch repair
kos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KORDIASMS9_03305 (polC)
03430 Mismatch repair
KORDIASMS9_03305 (polC)
03440 Homologous recombination
KORDIASMS9_03305 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kos03032
]
KORDIASMS9_03305 (polC)
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_03305 (polC)
Enzymes [BR:
kos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KORDIASMS9_03305 (polC)
DNA replication proteins [BR:
kos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KORDIASMS9_03305 (polC)
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KORDIASMS9_03305 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
DUF1836
PGM_PMM_III
Motif
Other DBs
NCBI-ProteinID:
AXG71050
LinkDB
All DBs
Position
3793930..3794583
Genome browser
AA seq
217 aa
AA seq
DB search
MNWFRRKSYPEFWNTYSSYFKTSQEQQLEHIRFVVFDTETTGLDTKKDRILSIGCIAVEG
LKIKVADQLETYVIQDIFNSETVKIHGLLKEGKLTKIDELEAVQQFLAYVKDAVLVAHHA
AFDVAMINNALRRLELPKLKNKTLDTGHLFQKTKLDTSKAHFSLDELSKRFNIPLHDRHT
ASGDAYITALLFLKILSKLTARDQLTLKDLLRPVRVI
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgaattggtttagacgcaaatcgtatcctgagttttggaatacttacagttcctatttt
aaaacatcacaagaacaacaacttgaacacattcgatttgtggtgtttgataccgaaacc
acaggtttggacacgaaaaaagacagaatactttccataggttgtattgctgtggaaggt
ttaaaaataaaagtagcggatcaattagaaacctatgtaatacaagacatattcaatagt
gaaacggtaaaaatacacggtttactcaaagaagggaagctgaccaaaattgacgaattg
gaagctgtacaacagtttctagcgtatgtcaaagatgcagtattggtagcgcaccatgcg
gcatttgatgttgcaatgatcaataatgcgttgcgaagacttgaattgccaaaactgaaa
aacaaaacgttggacacgggacatttatttcaaaaaacgaaattagacactagcaaagca
catttcagtctcgacgagctttccaaacgtttcaacattcccttgcacgacagacacact
gcttcaggtgatgcgtatattacggcattgctgtttttaaaaatcctttcaaaactaacc
gcgagagatcaattaacattgaaagatctattaagacctgtgagagttatataa
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