Kordia sp. SMS9: KORDIASMS9_03907
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Entry
KORDIASMS9_03907 CDS
T05562
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
kos
Kordia sp. SMS9
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kos03016
]
KORDIASMS9_03907 (truA)
Enzymes [BR:
kos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KORDIASMS9_03907 (truA)
Transfer RNA biogenesis [BR:
kos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KORDIASMS9_03907 (truA)
Prokaryotic type
KORDIASMS9_03907 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AXG71650
LinkDB
All DBs
Position
complement(4463633..4464421)
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AA seq
262 aa
AA seq
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MQRKRYYYLITLQYLGFRYHGWQKQPDVNTVQRMTERTLAYVFGHKNFKLLASGRTDAKV
SANEIAIELFLDNETLDIPEFLPLFNKNLPQDIRALAITETNEKFNIIQHPKVKEYIYLF
AFGEKYHPFAAPYMTNVLGDLDVELMKKGAKLFEGKHYLKTYCYKPTEHTVLEGEIELCE
IIENKLFTASFFPENSYLLRVQGAGFKRHQIRMMMGTLILLGKHELDLDFIKRSLLPGST
LEVNYIAPASGLMLNKMTFKDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaagaaaacgctattactatctcattacgcttcaatacttaggatttcgctatcat
ggttggcaaaaacagcctgatgtaaataccgtacagcgcatgacagaacgtacattagcg
tatgttttcgggcacaaaaacttcaaactcttagcttcaggtcgtacagatgccaaagtt
tctgcaaatgaaattgcgattgaattgtttttagacaatgaaacacttgacattccagag
tttctgccattgttcaacaaaaacttaccacaagatattcgtgcattggcaattacggaa
accaatgagaaattcaacatcattcaacatccgaaagtaaaagaatacatctatttattt
gcatttggagaaaaatatcatccgtttgcggcaccgtatatgaccaatgttttaggcgat
ttagacgtggaattgatgaaaaaaggagcaaagctgtttgaaggcaaacactatctaaaa
acctactgttacaaacccaccgaacatacggttttagaaggcgaaattgaattgtgtgaa
attattgaaaacaaactttttaccgcaagtttcttccccgaaaatagttatctattgcgc
gtacaaggcgcgggattcaaacggcatcaaatccgcatgatgatgggaacattaattcta
ctaggaaaacacgaacttgatcttgatttcatcaaacgttcgttattgccaggttcaaca
ttagaagtcaactacattgcaccagcttcaggattgatgcttaacaaaatgacttttaag
gacttatag
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