Kordia sp. SMS9: KORDIASMS9_03973
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Entry
KORDIASMS9_03973 CDS
T05562
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
kos
Kordia sp. SMS9
Pathway
kos00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KORDIASMS9_03973 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kos01007
]
KORDIASMS9_03973 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kos03016
]
KORDIASMS9_03973 (hisS)
Enzymes [BR:
kos01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
KORDIASMS9_03973 (hisS)
Amino acid related enzymes [BR:
kos01007
]
Aminoacyl-tRNA synthetase
Class II (A)
KORDIASMS9_03973 (hisS)
Transfer RNA biogenesis [BR:
kos03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KORDIASMS9_03973 (hisS)
Prokaryotic type
KORDIASMS9_03973 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
Z1
HGTP_anticodon2
RecX_HTH2
AOC_like
Motif
Other DBs
NCBI-ProteinID:
AXG71716
UniProt:
A0A345H578
LinkDB
All DBs
Position
complement(4540313..4541680)
Genome browser
AA seq
455 aa
AA seq
DB search
MAQKPSIPKGTRDFSPIEVAKRNYIFNIIQSAFQSFGFQPIETPSFEKSSTLLGKYGEEG
DRLIFKILNSGEKVRKADLKALEEGNLARFSNSLAEKALRYDLTVPFARYVVQHQNDITF
PFKRYQIQPVWRADRPQHGRFQEFFQCDADVVGSTSLWQEVEFVQLYDKVFSELGLNGVT
IKINNRKILSGLAEVIGAKDKLIDFTVALDKLDKIGEDGVKNEMMQKGISAEAIEKVQPL
FSFSGNLDEKLDLLKALLATSEEGMTGISELEFVFEAIEVLGLETATLDLDVTLARGLNY
YTGAIYEVAAPEGVKMGSIGGGGRYDDLTGIFGLKDVSGVGISFGLDRIYLVLEELDLFP
ETVSDKVEVLCVNFGEKEALASLKLIKVLREAGKSAELFPDNKNINKQMNYANKRDIPYV
IIIGGNELANNTCIVKNMKNGTQLEVPFDEVLTAF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcacaaaaaccaagcataccaaagggaacacgcgatttttctccgatagaagttgca
aaacgtaactacatttttaacatcatacaatcagcttttcaaagctttggatttcaaccg
attgaaacaccatcgtttgaaaagtcaagtacgttgttaggaaaatatggggaagaaggt
gatcgcttgatttttaaaatcttgaactctggagaaaaggtgcgaaaagcagacttaaaa
gctttggaagaagggaatttagcgcgtttttcaaattcattagccgaaaaagccttgcgg
tatgatttaacggttccttttgcgcgctatgtggtacaacaccaaaatgatataacgttt
ccttttaaacgctatcaaattcagccagtttggcgtgctgatagaccgcaacatggaaga
tttcaagaattttttcaatgtgatgcggatgtcgtaggttctacctcactttggcaagaa
gtggaatttgtgcaattgtatgataaagttttttcagagttaggtttgaatggcgtcacg
atcaaaattaacaatcgtaaaatactatcaggtttggcggaagtcattggtgctaaagat
aaactgattgatttcacagtcgccttagacaaacttgataagattggcgaagatggagtg
aaaaatgaaatgatgcaaaaaggcatttctgcggaagcgatcgaaaaagtacagccatta
ttcagtttttctggaaatctggatgaaaaactagacttgctaaaagcgcttttagctact
tcggaagaaggcatgacgggaatttcagaactcgaatttgtctttgaagccattgaagtc
ttaggtttagaaacagccacgttggacttagatgttacacttgctagaggattgaattat
tacacaggagccatttatgaagtagcggcgccagaaggtgtaaaaatgggttctattggc
ggcggcggacgttatgatgacttaacaggcatttttggtttaaaagatgtgagcggtgtg
ggaatttcgtttggtttggatagaatctacttggttttggaagaattggacttatttcca
gaaacggtttccgataaagtagaggtgttgtgtgtaaattttggcgaaaaagaagcctta
gcgtctttaaaactcatcaaagtattgcgagaagctggaaaaagtgcagagttatttcca
gacaataaaaacattaacaagcagatgaattatgccaataaacgcgatattccgtatgta
atcatcataggaggaaatgaactcgcaaacaacacgtgcattgtcaaaaacatgaaaaac
ggtacacaattggaagttccatttgatgaagtgttgacggcattttga
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