Kordia sp. SMS9: KORDIASMS9_04156
Help
Entry
KORDIASMS9_04156 CDS
T05562
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KORDIASMS9_04156 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kos03019
]
KORDIASMS9_04156 (recQ)
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_04156 (recQ)
Enzymes [BR:
kos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KORDIASMS9_04156 (recQ)
Messenger RNA biogenesis [BR:
kos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KORDIASMS9_04156 (recQ)
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KORDIASMS9_04156 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Helicase_Sgs1
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AXG71898
UniProt:
A0A345H5R0
LinkDB
All DBs
Position
4751738..4753846
Genome browser
AA seq
702 aa
AA seq
DB search
MITSALLTSTLKEYFGYDTFRPLQAEIINSIFKGNDNLVIMPTGGGKSICFQLPAILLEG
ITIVISPLIALMKDQVDGLTTNGISAAYINSSQNESQQQAIYSKIEKGEIKLLYTAPESL
SYLEYIFSSQTISLIAIDEAHCISSWGHDFRPAYTNLGYLKKRFPTVPVIALTATADKAT
REDIANQLNIPHARQHVASFDRKNLKLEVRPANNRIKQIINFIEKRPNESGIIYCLSRKA
TENVAEKLQNANVNAAAYHAGIGHASRAKIQEDFINDSCQVICATIAFGMGIDKSNVRWV
IHYNLPKNIEGYYQEIGRAGRDGLPSDTLLFHSYGDVIQLKKFAASSGNVEVQLAKLDRM
KEYADALSCRRKILLSYFGELISEDCGNCDVCTNPPQFFDGTVIAQKALSAVARVNGQEP
IGIIIDILRGAQNNTIFDKGYQDLKTYGIAKDIAWLDWKQYITQLINLGYLEIAFHEHNK
IKLTDFAKEVLFSEKKVALANLVAAEKEAEIQKKKPTKASKNSLFERLRALRLEIAREEE
VPAYQIFNDATLREMEAERPMSDEEFIRISGVGRIKMMNYGHTFMKEIINFTNEKKKKRK
VDTVQKTYELLQRGLSIEDISVERSLAESTIYSHIFKLYNAGKNINLQQFIDKHDLESMR
KAKETLENTEALKPYFEHFEEAISYNTIRIGLAILKAEAAEQ
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgattacatcagccctacttacaagtactttaaaggaatattttggttatgacacattt
agaccgcttcaagcagaaattatcaattctatctttaaaggaaatgacaatttggtcatc
atgcctactggtggcggaaaatccatttgttttcaattgcccgcaattttactagaaggt
attacaattgtaatttcgcctttaatcgctttaatgaaagatcaagtagacggattgacc
accaacggaatttccgcagcatatataaacagcagtcaaaatgaaagtcagcaacaagca
atttattctaaaattgaaaaaggagaaattaaattgttatatacggcaccagaaagttta
tcatatttagaatatatttttagcagtcaaaccattagcctcattgccatagatgaagcg
cattgtatttcttcttggggacatgattttcgtccagcgtataccaatcttggttatttg
aaaaagcgttttccaactgttcctgttattgctttgacagccactgccgataaagctacg
cgtgaagatattgcaaatcagttaaatattccgcacgctaggcagcatgtggcttctttt
gatcgaaagaatttaaaactagaagtgcgtcctgcgaataatcgcatcaagcaaatcatc
aattttatagaaaaacgcccaaatgaaagtggtattatttactgtttgagtcggaaagcc
acggaaaatgttgccgaaaagttacaaaacgccaatgtgaatgctgccgcctatcatgct
ggaattggtcatgcgtcacgtgctaaaattcaggaagattttatcaatgattcatgtcaa
gtaatttgtgctacaattgcttttggaatgggcattgacaagtcgaatgtgcgttgggta
attcattataatttaccaaaaaacatagaagggtattaccaagaaattggtcgtgcaggt
cgtgacggattgccttcagacaccttactttttcacagttatggcgatgtgattcagtta
aagaagtttgcagcaagttctggaaatgtagaggtacaactcgccaaacttgatcgcatg
aaagagtatgcggatgcgctgagttgtcgccgaaaaattttgttgagttattttggtgaa
ttgatcagtgaagattgcgggaattgcgatgtgtgtaccaatccgcctcagttttttgac
ggaactgtaattgcccaaaaagctttatctgccgtagcgcgtgtcaacggacaagaacca
attggaatcatcattgatattttgcgtggtgcacaaaataacacgatttttgataaaggc
tatcaagacttaaaaacctacggaattgccaaagacatcgcgtggcttgattggaaacag
tatattacgcaattgatcaacttgggctatttggagattgcatttcatgaacataataaa
ataaaacttaccgattttgcgaaagaggtattatttagtgaaaaaaaagttgccttagcg
aatttggtagcagccgaaaaagaagcagaaatacagaaaaagaaaccaacaaaagcttct
aaaaactctctgtttgagcgtttgcgagcgttgcgtttggaaattgcgagagaagaagaa
gtgcctgcgtatcaaatttttaatgatgccactttgcgtgagatggaagccgaacgtccg
atgtctgacgaagaatttatccgaattagtggcgttggtcgtatcaaaatgatgaattac
ggccatacttttatgaaagaaattatcaattttacaaacgaaaagaaaaagaaacgcaag
gttgatacggttcaaaaaacctatgaattactccaacggggtttgtctattgaagatatt
tctgtggaacgaagtttggcagaaagtactatttattcccacattttcaaattgtataat
gctggaaaaaatatcaatttgcagcagtttattgacaaacatgatttggaaagtatgcgg
aaagcaaaagaaactttggaaaatacggaagcattaaaaccgtattttgagcattttgaa
gaagctatttcatacaataccattcgtattggtttggcgattttgaaagcagaagctgcg
gaacagtaa
DBGET
integrated database retrieval system
