Kordia sp. SMS9: KORDIASMS9_04267
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Entry
KORDIASMS9_04267 CDS
T05562
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
kos
Kordia sp. SMS9
Pathway
kos03030
DNA replication
kos03430
Mismatch repair
kos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KORDIASMS9_04267 (dnaX)
03430 Mismatch repair
KORDIASMS9_04267 (dnaX)
03440 Homologous recombination
KORDIASMS9_04267 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kos03032
]
KORDIASMS9_04267 (dnaX)
03400 DNA repair and recombination proteins [BR:
kos03400
]
KORDIASMS9_04267 (dnaX)
Enzymes [BR:
kos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KORDIASMS9_04267 (dnaX)
DNA replication proteins [BR:
kos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KORDIASMS9_04267 (dnaX)
DNA repair and recombination proteins [BR:
kos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KORDIASMS9_04267 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
Rad17
AAA_14
AAA_5
AAA_30
RCF1-5-like_lid
nSTAND3
TIP49
DNA_pol3_delta_C
iSTAND
AAA_16
AAA_18
Mg_chelatase
RNA_helicase
DNA_pol3_gamma3
NPHP3_N
AAA_assoc_2
AAA_7
AAA_24
DUF815
Sigma54_activ_2
SRP54
NACHT
AAA_33
TsaE
Motif
Other DBs
NCBI-ProteinID:
AXG72005
LinkDB
All DBs
Position
4886649..4888400
Genome browser
AA seq
583 aa
AA seq
DB search
MEHFIVSARKYRPQTFKDVVGQQAITNTLENAIQRNHLAQALLFCGPRGVGKTTCARILA
KKINQDGTENPDEDFAFNIFELDAASNNSVDDIRSLIEQVRIPPQVGSYKVYIIDEVHML
SQAAFNAFLKTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRIGVKDAKEYLKYIA
KSQGVEADDDALHIIAQKADGAMRDALSIFDRVVSFSGKQLTRQAVTENLNVLDYEIYFT
ATDLMLENNIPQLLIDFNETLSKGFDGHHFIAGIASHFRDLLVCKNQATIALLEVGDQTK
QKYLEQSQKTSQQFLMKGIELANDSDLKYKTSRNQRLLVELCLMQLASINYDGEKKNSKH
FIIPATFFLAHGKKVNPIANVTEANTSPQTKSTEEIHSNSAANEAEKPSTEVKKAATPPP
KPKIDISMMRNKVSGLSLSSIKAKQEHLKKQQSKVVDQKELPKDAFTEEKMVEVWNAYVN
KIDRKGEKIMASSLSTDVPKLKDATTISIELPNETMKIEIERAQYPLLEFVRAQLNNYDV
SLEILVNEKAEKKYAFTARDKYEKLKEINPLVEKLRKDFDLEI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggaacatttcattgtatcagctcgtaaatacagaccgcaaacatttaaagatgttgtt
ggtcaacaagcgattacaaatacgttggaaaatgccatacaacggaatcatttagcacaa
gccttactattttgtggaccgcgaggagttggaaaaacaacctgtgcgcgaatcttagcg
aaaaagatcaatcaagatggtacagaaaatcctgatgaagactttgcctttaatattttt
gaactcgatgctgcttctaataattcggtagacgatattcgaagtttgattgaacaagtg
cgcattccaccgcaagtgggaagctataaagtgtatattattgatgaggtacacatgttg
tcgcaagcagcttttaatgcgtttttgaaaaccttagaagaaccgccaaaacacgccatt
tttattctggctacgaccgaaaaacacaaaattattccaacgattttatcacgatgtcaa
atttttgattttaaacgaattggtgtcaaagatgcaaaagaatatttaaaatatattgct
aaaagtcaaggagttgaagcagatgatgacgctttacatattattgcccaaaaggcagat
ggtgccatgcgtgatgcgttgtctatttttgacagagtggtaagtttttcaggaaaacag
ttaacgcgacaagcggtcacggaaaacttgaacgttctcgattacgaaatttactttact
gcaactgacctgatgttagaaaataacattccacagttattgatagattttaacgaaacc
ttatccaaaggctttgacggacatcattttattgctggaattgcttcacattttagagat
ttattagtctgcaaaaatcaagctacaattgctttgctggaagttggcgatcagacgaaa
cagaaatatttggaacaatcgcaaaaaacgtcacaacaatttctcatgaaaggaattgaa
ttggcaaatgattctgatttaaaatataaaacgagtcgaaaccagcgactgttggtcgaa
ttgtgtctcatgcaacttgcctctatcaattatgatggagaaaaaaaaaatagcaagcac
ttcataattccggctacttttttcttggcacatggcaaaaaagtaaacccaattgccaac
gttaccgaagccaatacctcgccacaaacgaaatctacagaggaaatacattccaattcc
gcagcaaacgaagcagagaagccatctacggaagtgaaaaaagcagcaacaccgccgcct
aaacccaagattgacatttccatgatgcgcaacaaggtttctggtttgtcgctatcaagt
atcaaagcaaagcaagaacacctaaaaaaacaacaaagtaaagttgtagatcagaaggaa
ttgccaaaagatgcatttacagaagaaaaaatggtggaagtttggaatgcgtatgtgaat
aagattgatcggaaaggagaaaaaattatggcttcttctctgtcaaccgatgttccaaaa
ttgaaagatgccacgaccatttctattgaattgcctaatgaaaccatgaaaattgaaatt
gaacgcgcacaatatccattgctggaatttgtacgtgcacaattgaataattatgacgta
tcactagagattctcgtaaatgaaaaggcggagaaaaaatatgcgtttaccgcgcgtgat
aagtatgagaaattgaaagaaatcaatccgctcgtagaaaagctgcgaaaggattttgac
ttagaaatttaa
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