Kordia sp. SMS9: KORDIASMS9_04278
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Entry
KORDIASMS9_04278 CDS
T05562
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
kos
Kordia sp. SMS9
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kos03016
]
KORDIASMS9_04278 (rnz)
Enzymes [BR:
kos01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KORDIASMS9_04278 (rnz)
Transfer RNA biogenesis [BR:
kos03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KORDIASMS9_04278 (rnz)
Prokaryotic type
KORDIASMS9_04278 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_4
Lactamase_B
Hepatitis_core
Motif
Other DBs
NCBI-ProteinID:
AXG72016
LinkDB
All DBs
Position
complement(4898896..4899804)
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AA seq
302 aa
AA seq
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MKLTILGCYAATPTKNTNPTAQILEIRNHIFLIDCGEGTQVQLRRSKVKFARVKHIFISH
LHGDHFYGLIGLISTFMLLGRNADLHIYGPKGLKELTLLQLKLTKSWTSYKLCFHELESD
QPEVLFEDDKVTVTTIPLSHRVYANGFLFMEKEKERKLNINAVLNYEIDKCYYQNIKKGR
DITLDSGEVIPNEKLTFDPPKPKGYAFCSDTVYFPQIVHQIKNVTVLYHEATFLDKHENL
AEKTKHTTAKQAAMIAKAAEVKQLILGHFSTRYDGFDEFKEEAKAVFENVVLADDGKVFE
LD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
gtgaaattaaccatactcggctgttacgccgctacaccaaccaaaaataccaatccaaca
gcacaaatattagaaatcagaaatcatatctttttgattgattgtggcgaaggaacacaa
gtacaattacgccgcagcaaagtgaaatttgcacgagtcaagcacatttttatctcgcac
ttacatggcgatcatttttatggattgatcggattaatttcaaccttcatgttgttgggc
agaaatgcagacttacatatttacggtccaaaaggtttaaaagaactaacgcttttacaa
ctcaaattgacaaaatcgtggacgagttacaaactgtgttttcacgaattggaaagcgac
caacctgaagtgttatttgaagacgacaaagttacggtaacaacgattccattaagtcat
cgtgtatacgcgaacggttttctattcatggaaaaagaaaaagagcgcaagctcaatatc
aatgcggttttaaactatgaaattgacaaatgttactatcaaaatatcaaaaaagggaga
gacattacgttagattctggcgaagttatccctaacgaaaaactaacgtttgatccgcca
aaaccaaaaggatatgcattttgtagtgacacggtgtattttccacaaatcgtacatcaa
atcaaaaacgtcacagttttataccacgaagctacttttttagataaacatgaaaattta
gccgaaaaaaccaagcatacaaccgcaaaacaagccgccatgattgccaaagctgctgaa
gttaaacaattaatattaggtcatttttccacacgatatgatggttttgacgaatttaaa
gaagaagccaaagcagtgtttgaaaatgtggtgttggcagatgatggtaaggtttttgag
ttagattaa
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