Kordia sp. SMS9: KORDIASMS9_04559
Help
Entry
KORDIASMS9_04559 CDS
T05562
Name
(GenBank) putative ABC transporter ATP-binding protein
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
kos
Kordia sp. SMS9
Pathway
kos02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KORDIASMS9_04559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kos02000
]
KORDIASMS9_04559
Transporters [BR:
kos02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KORDIASMS9_04559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_30
SMC_N
RsgA_GTPase
AAA_22
AAA_16
AAA_29
MMR_HSR1
DUF5906
AAA_21
AAA_23
FtsK_SpoIIIE
DUF87
nSTAND3
AAA_24
Zeta_toxin
DEAD
AAA_15
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AXG72290
LinkDB
All DBs
Position
complement(5238757..5240547)
Genome browser
AA seq
596 aa
AA seq
DB search
MAKVTGTVFDFGLFKRLLTYTNPYKITLYFVAIAAVLLSVFAVARPVLLKITVDDYIVTK
DKEGLLMYILFMLGVLMLEVIFQFLFVFYANWLGQSIIKDIRRKLFNHMLRFKMAYYDKS
SVGRLVTRAVSDIETIASIFSQGLFVIIADLLKMLVVMGVMLWLSWKLSIIVFAILPLII
YATRVFQKAMKSAFEEVRAQISNLNSFVQERVTGMKIVQLFSREETEYKNFKEINEKHKK
GWLKTIWYNSIFFPIPDLANSIAVGLIVWYGGLMSATIVTTELGTEGSAELGNVVAFIMM
IGMLFRPLRQIADKFNTLQMGMVAAGRIFDILDTDSQIEDAGETASLNIKGNLTFKGVRF
SYVEGEEVLHGISFDVQQGQTVAIVGATGAGKSTIINLLNRFYEIDSGTIAIDGIDIKDV
KLAALREKIAVVLQDVFLFADTILNNITLQNPEISRETVEKAAKQIGVHEFIMSLPNNYD
YNVKERGGMLSSGQRQLISFLRAFVTNPRILILDEATSSVDSYSEQLIQNATDTITKGRT
SIVIAHRLATIKKADTIIVMDAGKIVEKGSHDELLQIENGYYKNLYEVQFIQQEAV
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagtaacaggaacagtatttgattttggtctttttaaacgcttattgacctat
acaaatccctataaaatcaccttgtattttgtagcaattgcagcagtattactgtctgta
ttcgcggtggcgcgtcctgttttactgaaaattacagtagatgattacatcgtcacgaaa
gacaaagaaggcttgctcatgtacattttattcatgttgggcgttttaatgctggaagta
atttttcagtttttattcgtgttttatgcaaactggctcggacaaagtatcataaaagac
attcgaagaaaattattcaatcacatgctgcggttcaagatggcgtattacgacaaatct
tctgtaggacgtttggtcactagagcagtaagtgatattgaaacgattgctagtattttt
agtcaaggattatttgtcattattgcagacttgttgaaaatgctcgtagtcatgggcgta
atgctgtggctcagttggaaattatccatcattgtctttgcgattttacctttaattatt
tatgcgacacgcgtatttcaaaaagccatgaaatcagcgtttgaagaagtacgtgcgcaa
atttccaatctcaattcctttgtgcaagaacgtgtcacgggaatgaaaatcgtacaatta
ttctcaagagaagaaacagaatacaaaaactttaaagaaattaacgagaaacataaaaaa
ggttggttaaaaacgatttggtataactccattttctttccaattcccgatttggcaaac
tccattgccgtaggtttgattgtgtggtatggcggattgatgtcagcaacaatcgtaacg
acggaattaggcacggaaggttctgcagaattggggaatgtggtcgcatttatcatgatg
attggcatgttgtttagaccattacgacaaatcgcagacaaattcaacaccttacaaatg
ggaatggttgcggcaggacgtatttttgatattttagacaccgatagtcaaattgaagat
gcaggagaaacggcttcgttaaacatcaaaggaaatttaacatttaagggtgtgcgtttt
tcgtatgtagaaggcgaagaagtattgcatggaatttcgtttgacgtacaacaagggcaa
actgttgccattgtgggcgcaacaggagcaggaaaatctaccattatcaacttattgaat
cgtttttacgaaatagattccggaacaattgctattgacggtattgatattaaagatgta
aaattggcggctttgcgtgaaaaaatagcggtggttttacaagatgtatttttatttgca
gataccattctcaacaatatcaccttacaaaaccctgagatcagtcgtgaaacggttgaa
aaagcggcaaaacaaattggcgtacatgagttcattatgagtttgccaaacaattacgat
tacaatgtaaaagaacgtggcggcatgctttcttcagggcagcgacaattaatttcattc
ttacgtgcatttgtgaccaatcctagaattttaattttggatgaagccacttcgtctgtc
gattcatattcagaacaactcattcaaaatgctacagataccatcaccaaaggaagaacg
tccattgtgattgctcaccgattggcaacaattaaaaaagcagataccattattgtgatg
gatgcgggtaaaattgttgaaaaaggttcgcacgacgaattgttacaaattgaaaacgga
tattataaaaacttatacgaagtacaatttattcagcaggaagcggtgtaa
DBGET
integrated database retrieval system
