Kordia sp. SMS9: KORDIASMS9_04560
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Entry
KORDIASMS9_04560 CDS
T05562
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
kos
Kordia sp. SMS9
Brite
KEGG Orthology (KO) [BR:
kos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kos03016
]
KORDIASMS9_04560 (truA)
Enzymes [BR:
kos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
KORDIASMS9_04560 (truA)
Transfer RNA biogenesis [BR:
kos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KORDIASMS9_04560 (truA)
Prokaryotic type
KORDIASMS9_04560 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF7045
Motif
Other DBs
NCBI-ProteinID:
AXG72291
UniProt:
A0A345H6V3
LinkDB
All DBs
Position
complement(5240540..5241292)
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AA seq
250 aa
AA seq
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MRYFIELSYNGENYHGWQNQPNAISVQEVIEKALSVLLRSEISIVGAGRTDAGVHAKQMY
AHFDTEIAFHATELTFKLNSFLPKDVAIQEIHQVHKDAHARFDATGRTYEYWIVTQKNPF
HNQSAHFVFKPLNVPLMNEAAKELFKYNDFKCFSKTHTDVKTYICKIEKAVWEQKNELLV
FTIRADRFLRNMVRAIVGTLLDVGLGKLSISEFKQIIASRDRNNAGTSVPGKALYLTAVT
YPAETFTING
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
ttgagatacttcattgaactttcttataatggcgaaaattatcacggttggcaaaatcaa
ccgaatgccatttcggtacaagaagtgattgaaaaagccttgtctgtcttattgcgatca
gaaatttcaattgtaggcgcaggacgaacagatgcaggcgtgcatgccaaacaaatgtat
gcacattttgacacagaaattgcgtttcatgccactgaattaacgttcaaattgaattcg
tttttaccaaaagatgttgctattcaggaaattcatcaagttcacaaagacgctcatgcg
cgatttgatgctacaggcagaacgtacgaatattggatcgtcacacaaaaaaatccattt
cacaatcaatcggcacacttcgttttcaaaccactaaatgtacctttgatgaatgaagcg
gcaaaagaattgttcaagtacaacgattttaaatgtttttccaaaacacatacagacgta
aaaacctatatctgtaagattgaaaaagccgtttgggaacaaaaaaatgaactattggta
ttcaccattcgtgccgatcgtttcttgagaaacatggtacgcgccattgtaggaacgctt
ttggatgtcggattggggaaattaagcatatcagaatttaaacaaatcatagcatcgaga
gatcgaaataacgcaggcacttcggtacctggaaaagccttatatttaaccgcggtaaca
tatccagcagaaacctttacaatcaatggctaa
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