Kosakonia sp. CCTCC M2018092: EH164_00485
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Entry
EH164_00485 CDS
T05734
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EH164_00485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kot03400
]
EH164_00485
Enzymes [BR:
kot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EH164_00485
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EH164_00485
DNA repair and recombination proteins [BR:
kot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EH164_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
AZI85633
LinkDB
All DBs
Position
98113..98922
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGETILHAVVRNGRLRWPVSDEIHSLSDKPVLSVQRRAKYLL
LELPDGWIIIHLGMSGSLRILPHELPAQKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKEL
EGHNVLAHLGPEPLSDAFNADYLREKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFAAG
IHPDRLASSLSQQEYELLVRVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRE
GQPCRICGAPIVAAKHAQRSTFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccagccgcagaggcattgagccgcacctggtcggt
gagaccatcctgcatgcggtggtgcgtaacggccgcttacgctggcctgtttccgatgag
atccacagcctgagcgataaaccggtgctcagcgtgcagcgacgcgctaaatacctgctg
ctcgaactgccggatggctggatcatcattcacctcggtatgtccggcagtctgcgcatt
cttccccatgagcttcccgcacaaaaacatgaccatgtcgatctggtgatgagcaacggc
aaagtgctgcgttacaccgatccgcgtcgtttcggggcctggctgtggaccaaagagctg
gaagggcataacgtgctggcgcatctcggcccggagccgctgagcgacgcctttaatgcc
gactatctgcgggagaagtgcgcgaagaagaaaacggcgatcaaaccctggctgatggat
aacaagctggtggtgggcgtcgggaatatttatgccagcgaatcgctgtttgccgccggg
atccatcccgatcggctcgcttcatccctctcgcagcaggagtatgaactgctggtacgc
gtgatcaaagcggtgctgttacgctccattgagcagggcgggacgacgctgaaagacttt
ctgcaaagcgatggcaaaccaggttatttcgcgcaggagttgcaggtttacgggcgagaa
ggacagccgtgccgcatctgcggtgcgccaatcgtggcggcaaaacatgcgcagcgctcg
acgttctactgccgtcagtgccagaaatag
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