Kosakonia sp. CCTCC M2018092: EH164_02000
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Entry
EH164_02000 CDS
T05734
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EH164_02000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kot03021
]
EH164_02000
03400 DNA repair and recombination proteins [BR:
kot03400
]
EH164_02000
Enzymes [BR:
kot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EH164_02000
Transcription machinery [BR:
kot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EH164_02000
DNA repair and recombination proteins [BR:
kot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EH164_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AZI85915
LinkDB
All DBs
Position
415728..416717
Genome browser
AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLSKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgactgaggttgag
attgatggtgtacttcatgagtacagcaccaaagaaggcgttcaggaagatatccttgaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttattctt
actctgagtaaatctggcattggccctgtgaccgcagccgacattacccacgacggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccacctgaccgatgaaaacgcatctatc
aatatgcgtatcaaagttcagcgcggtcgtggttacgtgccggcgtctgcccgaattcat
tcggaagaagatgagcgcccgatcggccgtctgctggttgatgcgtgctacagccctgta
gagcgaattgcctacaatgttgaagcagcacgtgtggaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggcagaacaacttgaagctttcgttgatttacgtgatgtacgtcagccg
gaagttaaagaagagaaaccagagttcgatccgattctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgccttaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
accgagattaaagacgtgctggcctcacgtggtctgtctctgggcatgcgcctggaaaac
tggccgccggcaagcattgctgacgagtaa
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