Kosakonia sp. CCTCC M2018092: EH164_02580
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Entry
EH164_02580 CDS
T05734
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH164_02580 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kot03019
]
EH164_02580 (pnp)
03016 Transfer RNA biogenesis [BR:
kot03016
]
EH164_02580 (pnp)
Enzymes [BR:
kot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EH164_02580 (pnp)
Messenger RNA biogenesis [BR:
kot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EH164_02580 (pnp)
Transfer RNA biogenesis [BR:
kot03016
]
Prokaryotic type
tRNA degradation factors
EH164_02580 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
KH_2
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AZI86020
LinkDB
All DBs
Position
529815..531950
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIIRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVYGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPEADK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGENFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAKFAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQTQPAEASEAPQAELGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgctgaatccgatcattcgtaaattccaatatggtcaacacaccgtcacgctggaaacc
ggcatgatggcccgtcaggcaaccgctgccgtgatggtaagcatggacgacaccgcggta
ttcgttaccgttgttggccagaaaaaagcaaaaccaggtcaggacttcttcccgctgacc
gttaactaccaggagcgtacctacgctgccggtaaaatcccgggtggcttcttccgtcgt
gaaggccgtccgagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggtttcgtcaacgaagtccaggttatcgccaccgtagtttccgtt
aacccgcaggttaacccggatatcgtagcgatgattggtgcttctgctgcactgtctctc
tctggtattccgttcaatggcccgatcggcgccgcgcgcgttggttacatcaacgaccag
tatgtgctgaacccgacccaggaagagctgaaatccagcaagctggatctggttgtggcc
ggtaccgaagccgctgtgctgatggttgaatccgaagcagaactgctgagcgaagatcag
atgctgggcgcggtggtttatggccacgagcagcagcagattgttattcagaacatcaac
gatctggtgaaagaagcgggtaaaccgcgctgggactggcagccggaagcggtcaacgaa
gcgctgaacgcgcgcgttgcagcgctggcagaatcccgtctgagcgatgcttaccgcatc
accgacaaacaggagcgttacgctcaggttgacgtgatcaaatctgaaaccatcgcgacg
ctggttgcagaagatgagaccctggacgctaacgagctgggcgaaatcctgcacgctatc
gagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtatcgatggccgcgaa
aaagatatgatccgtggtctggacgttcgtaccggcgttctgccgcgtactcacggctcc
gcgctctttacccgtggcgaaacgcaggcgctggtaacagcaaccctgggtaccgcacgc
gacgcgcagaacatcgacgaactgatgggcgagcgcactgacagcttcctgttccactac
aacttccctccgtactccgtaggtgagaccggtatggtcggttcgccgaagcgtcgtgaa
attggtcacggtcgtctggcgaaacgcggcgtgctggctgttatgcccgaagctgataaa
ttcccgtacaccgtgcgtgtggtttctgaaatcaccgaatccaacggttcctcttccatg
gcttccgtgtgcggcgcatcgctggcactgatggatgcaggcgtaccggtgaaagccgct
gttgccggtatcgcaatgggcctggtgaaagagggcgaaaactttgtcgttctgtctgac
attctgggcgatgaagatcacctgggcgacatggactttaaagtggccggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaatcgaaggcatcaccaaagagatcatgcag
gttgcgctgaaccaggcgaaaggtgcacgtctgcatatcctcggtgtaatggagcaggcg
attaacgcgccgcgtggcgatatctctgagttcgcgccgcgtatccacaccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggctctgttatccgtgccctgacc
gaagagaccggcacaaccatcgaaatcgaagatgacggtaccgtgaaaatcgcggcaacc
gacggcgacaaagcgaaattcgcgattcgtcgtatcgaagagatcaccgctgaaatcgaa
gtgggccgtatctacaacggtaaagtcacccgtatcgtcgactttggtgcgtttgttgcc
atcggtggcggtaaagagggcctggtacacatttctcagatcgccgataagcgcgtagag
aaagtgaccgactacctgcagatgggtcaggaagtaccggtgaaagttctggaagttgac
cgccagggccgtattcgtctaagcattaaagaagcaactgaacaaactcagcctgctgaa
gcgtcagaagcgccgcaagcagaactgggcgagtaa
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