Kosakonia sp. CCTCC M2018092: EH164_02595
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Entry
EH164_02595 CDS
T05734
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH164_02595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kot03019
]
EH164_02595
03009 Ribosome biogenesis [BR:
kot03009
]
EH164_02595
Enzymes [BR:
kot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH164_02595
Messenger RNA biogenesis [BR:
kot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH164_02595
Ribosome biogenesis [BR:
kot03009
]
Prokaryotic type
rRNA helicases
EH164_02595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZI86022
LinkDB
All DBs
Position
533127..535031
Genome browser
AA seq
634 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAF
SLPLLHNIDPDLRAPQILVLAPTRELAVQVAEAMTDFSKHMHGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGTRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSSEEEMDI
ETLAAALLKMAQGERPLILPPDAPMRPKREFRERDERFERRGDRNDRNDRGPRTERAGED
RPRRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELP
KGMPGEVLQHFTRTRILNKPMNMQLLGDAQPRERSERRPGGGERRSFGGGERREGGRGPR
RDGAAPAGAGRFSGERRENRGPRREEGTTRRRDA
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatccttgaagcc
cttaacgatctcggttacgaaaaaccatctccgatccaggctgagtgcattccgcacctg
ctgaacggtcgtgacgtgctgggcatggcccagactggtagcgggaaaaccgcagcgttt
tctcttccgctgctccataacatcgatccggacctgcgtgcgccgcagatcctcgtgctt
gctccgacccgcgaactggcggttcaggtagctgaagcgatgaccgatttctctaaacac
atgcatggcgtgaacgtggttgctctttacggcggccagcgttatgacgtgcaattacgc
gccctgcgtcagggcccgcagatcgttgtcggtacgccgggacgcctgctggatcacctg
aaacgcggcaccctggacctctccaaactgagcggtctggtgctggatgaagccgacgaa
atgctgcgcatgggctttatcgaagacgtagaaactatcatggcgcagatcccggaaggt
caccagaccgctctgttctccgccaccatgccggaagcgatccgtcgcattacccgccgc
tttatgaaagagccgcaggaagtgcgcattcagtccagcgtgacaactcgcccggacatc
agccagagctactggtctgtgtacggcatgcgtaaaaacgaagcgctggttcgcttcctt
gaagcagaagattttgatgctgcgatcatcttcgtgcgcaccaaaaacgcgaccctggaa
gtggctgaagcgctggagcgcaacggttacaacagcgccgcgctgaacggtgacatgaac
caggccctgcgtgagcagactctggagcgtctgaaagatggtcgtctggacatcctgatt
gcaaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggttgttaactat
gacatcccgatggactccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggccgcgccctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatc
gaacgtacgatgaagctgaccattccggaagtagagctgccgaacgcagaactgctgggc
actcgccgtctggaaaaattcgccgcgaaagtacagcagcagctggaaagcagcgatctg
gaccagtaccgcgcgctgctggcgaaaatccagccctcttctgaagaagagatggatatc
gaaacgctggctgccgcactgctgaaaatggcacagggcgaacgtccgctgatcctgccg
ccggatgcaccgatgcgtcctaagcgtgagttccgcgagcgtgatgagcgtttcgaacgc
cgtggcgatcgtaacgaccgcaatgaccgtggtccgcgtaccgaacgtgccggtgaagac
cgtccgcgtcgtgagcgtcgcgatgttggtgatatggaactgtaccgtattgaagtgggc
cgtgatgacggtgttgaagttcgtcatattgttggcgcaatcgccaacgaaggcgacatc
agcagccgctacatcggcaacatcaagctgttcggttctcactccaccatcgagctgccg
aaaggcatgccgggcgaggttctgcagcactttacccgcacgcgtattctcaacaaaccg
atgaatatgcagctgctgggcgatgcacagccgcgtgagcgcagcgaacgccgtcctggc
ggcggtgagcgtcgtagcttcggcggcggcgagcgtcgtgaaggtggtcgcggtccgcgt
cgtgatggtgcagcacctgccggtgcaggccgtttcagcggtgagcgtcgtgaaaatcgc
ggcccgcgccgcgaagaaggtactacccgtcgtcgtgacgcgtaa
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