Kosakonia sp. CCTCC M2018092: EH164_04185
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Entry
EH164_04185 CDS
T05734
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kot03016
]
EH164_04185 (truD)
Enzymes [BR:
kot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EH164_04185 (truD)
Transfer RNA biogenesis [BR:
kot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EH164_04185 (truD)
Prokaryotic type
EH164_04185 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AZI86319
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All DBs
Position
900367..901416
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AA seq
349 aa
AA seq
DB search
MTEFDNLTFLHGKPGGSGILKASPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHVREVSFAGQKDKHAVTEQWLCARVPGNGMPDLSQFTLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREISSRAEVESRLKAIAEQGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQVVSERLKKPGFNQVVVGDALQLAGRGSWFVATNEE
RDELQARVDAKALMITAPLPGRGEWGTQDAALEFEQQAIADAPELQTLLVREKVDAARRA
MLLYPQALSWNWWDDATVEVRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggaatttgataatctcaccttcctgcacggcaagcctggcggcagtggcatcctg
aaagccagcccggaagatttcgttgttgtggaggatctgggcttcgagccagacggcgaa
ggtgagcatattctggtacgaattctgaaaaatggctgcaatacgcgttttgttgctgac
gctttagcgaaattccttaaaattcatgtgcgtgaagtgagcttcgccggtcagaaagat
aagcatgccgttacggaacagtggctttgtgcccgcgtaccgggtaatggtatgccggat
ctcagccagttcacgctcgaaggctgcaaagtgctggagtatgcccgccataaacgcaaa
ctgcgtctcggcgcgctgaaaggcaacgcctttacgctggtgctgcgggaaataagcagc
cgtgcagaggttgaatcgcgcttgaaggccatcgctgaacagggcgtgcccaactatttt
ggcgcacagcgttttggcatcggcggcagtaatctgcagggcgcactgcgctgggcgcaa
agcgacgcgccggttcgcgatcgtaacaaacgcagtttttggttgtccgccgcgcgcagc
gcgttgtttaatcaggtggtcagcgagcggctgaagaaaccaggcttcaatcaagttgtt
gtcggcgatgcgctacaattagcgggtcgcggcagctggttcgtggcgaccaatgaggag
cgcgacgagttacaggcgcgtgtcgatgcgaaagcactgatgatcaccgcgccgctgccg
ggtcgcggcgagtggggaacacaagacgcggcgctggagtttgagcagcaagcgattgct
gatgcgccagagttacagacgctgctggtgagagaaaaagtggacgctgcgcgccgtgcg
atgttgctctatccgcaggcgctcagctggaactggtgggatgacgccaccgtcgaggta
cgtttctggctaccggcggggagttttgccaccagtgtggtcagggaacttatcaacaca
tcgggtgattatgcgaatattgctgagtaa
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