Kosakonia sp. CCTCC M2018092: EH164_07405
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Entry
EH164_07405 CDS
T05734
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
kot
Kosakonia sp. CCTCC M2018092
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kot03400
]
EH164_07405
DNA repair and recombination proteins [BR:
kot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
EH164_07405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
Helicase_C
AAA_30
SWI2_SNF2
AAA_16
SLFN-g3_helicase
AAA_22
zf-tcix
DUF7577
DZR
AAA
MgtE_N
Motif
Other DBs
NCBI-ProteinID:
AZI89718
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Position
complement(1572235..1573995)
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AA seq
586 aa
AA seq
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MTFTLRPYQREAVDATLAHFRQHAEPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYIALGLEADIFAAGLKRKQSHGKVVFGSVQSVARNLDQFQGEFSLLVVDECH
RISDDDDSQYQQILSHLQEVNPRIRLLGLTATPFRLGKGWIYRFHYHGMVRGDEKALFRD
CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQTQSNGLFSEAELNRELKKQKRITPH
IVSQIVEFAQTRKGAMIFAATLEHAREITGLLPADDAALITGETPGPQRDALIEAFKQQQ
FRFLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
HDLYAPEIGAPKGKSDNVPVQVFCPGCGFANTFWGKTTADGTLIEHFGRRCQGWFEDDEG
HREQCDYRFRFKNCPHCNAENDIAARRCRSCDAILVDPDDMLKAALKLKDALVLRCSGMT
LQHGADEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFMRPHTRTPGVPLRWIVA
ADIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgacttttacgctacgcccctatcaacgcgaagcggtggatgccaccctcgcccatttt
cgccaacacgctgaacccgcagtgattgtgctgccgaccggcgccggaaaaagcctggtg
attgccgagctggcacggctggcgcgcggccgcgtgctggtgctggcccatgtgaaagag
ctggttgcgcagaaccacgccaaatatatcgcccttgggctggaagcagatattttcgcc
gccgggctgaagcgcaagcagagccacggcaaagtggtgtttggcagcgtgcaatcggta
gcgcgcaaccttgatcagttccagggtgagttctccctgctggtggtggatgagtgccac
cgcatcagcgatgatgacgacagccagtatcagcaaattctttcccatctgcaggaggta
aatccgcgcattcgcctgctcggcctgacggcaaccccctttcgcctcggcaaagggtgg
atttaccgctttcactatcacggcatggtacgcggggatgaaaaagcgctgttccgcgac
tgtatttatgaactgccgctgcgctatatgattaaacacggttatctgacgccgccggag
cggctggatatgccggtggtgcagtacgatttcagccgcttacagacgcagagtaacggc
ctgttcagcgaagcggagctgaaccgcgagctgaagaagcagaagcgtattacgccgcac
attgtcagccagattgttgagtttgcgcagacgcgcaaaggggcgatgatttttgccgcc
acgttggagcacgcccgcgagatcaccggcctgctgcctgcggacgacgcggcgctaatc
accggcgaaacgcccggcccgcagcgtgatgccttaattgaggctttcaaacagcagcag
ttccgctttctggtcaacgtcgcggtgttgaccaccggctttgatgcgccgcatgtcgat
ctgattgccattttgcgcccgacggaatccgtcagcctctatcagcagatcgtcggtcgc
ggcctgcggctggcaccggggaaaaccgactgcctgatcctcgattacgccggtaacccg
cacgacctctacgccccggagattggcgcgccgaaaggcaaaagcgataacgtgccggtg
caggttttctgcccgggctgcggctttgctaatactttctggggaaaaaccaccgctgac
ggcacgctgattgagcactttggccgccgctgccagggctggtttgaagatgatgagggc
catcgcgagcagtgcgattaccgttttcgctttaaaaactgcccgcactgcaacgcagag
aatgatattgccgctcgccgctgccgcagttgtgatgccatcctcgttgacccggacgat
atgctgaaagcggcgctgaagctgaaagatgcgctggtgctgcgttgcagcggcatgaca
ttgcagcacggcgcggatgagaaaggcgaatggctgaaaatcacctattacgatgaagat
ggcgcggatgtcagcgagcgctttcgtctgcaaactccggcgcagcgcaccgcttttgag
caactttttatgcgaccgcatacgcgtacgcccggcgtgccgttacgctggattgtggcg
gcagatatcgtcgcccagcaggcgctgctgcgtcaccccgattttgtcgtcgcacgtatg
aaaggccagtactggcaggtgcgggaaaaagtgtttgattacgaaggtcgctttcgtcgg
gcgaatgaattgcgcggctaa
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