Kosakonia sp. CCTCC M2018092: EH164_09710
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Entry
EH164_09710 CDS
T05734
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kot03016
]
EH164_09710
Enzymes [BR:
kot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
EH164_09710
Transfer RNA biogenesis [BR:
kot03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EH164_09710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
AZI87310
LinkDB
All DBs
Position
2026826..2027953
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AA seq
375 aa
AA seq
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MNYQMITTNDALAAICEAASAFPAIALDTEFVRTRTYYPQLGLLQMYDGERVTLIDPLTI
TDWTPFRDLLTNTAITKYLHAGSEDLEVFLNTFGVQPQPMIDTQILAAFCGRPMSWGFAS
MVEEFTGTAIDKSESRTDWLARPLTERQCDYAAADVWYLLPIAGKLLAETEQAGRLAAAL
DECRLMMQRRQEVLAPDEAWREITNAWQLRPRQLACLQLLASWRLRKARERDMAVNFVVR
EEHLWAVARYMPGSLGELDSLGLSGSEIRFHGKTLVALVAQAQELPEESLPEPLRNLMDM
PGYRKAFKAIKAQVQAISESENISVELLASRRQINQLLNWHWKLKTQNSLPELISGWRGE
LMADRLNALLAEYPQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgataacgacgaacgacgcgctggcagcgatatgtgaagccgccagt
gcgtttccagccattgccctcgatacagaatttgtccgcacccgcacgtactacccgcaa
ctgggtctgttgcagatgtatgacggcgagcgtgtcacgcttatcgatccgctgaccatt
accgactggacgccgtttcgcgatctgctcaccaatacggcaatcaccaagtatctgcat
gcgggaagcgaagatctggaagtgttcctcaatacgtttggcgtgcagccgcagccgatg
attgatacgcagatcctcgcggcattctgcggacgtccgatgtcatggggctttgcctcg
atggtggaagagtttaccggaacggcgattgataaaagcgaatcccgcaccgactggctg
gcgcgtccgctgaccgaacgtcagtgtgactatgcggcggcagatgtctggtatctgctg
cctatcgccggaaaactgctggcggaaaccgagcaggcgggcaggctggctgccgcgctc
gatgagtgtcgtttaatgatgcagcgccgccaggaagttctggctccggacgaggcatgg
cgcgaaatcaccaatgcctggcagctgcgcccgcgccagctggcctgtttgcaactgctg
gcatcctggcgtctgcgcaaggcgcgcgaacgcgacatggcggtgaattttgtggtgcgc
gaagagcacctctgggcggtggcgcgctatatgccaggcagcctcggcgagctggatagc
ctcggtctctccggcagcgaaatccgttttcacggtaaaaccctggtggcactggtcgcg
caggcgcaggagttgccggaagaatcactacctgaaccgctgcgtaatttgatggatatg
cccggctatcgcaaagcgtttaaagcgattaaagcgcaggtgcaggcaatcagtgaaagc
gaaaatattagcgttgagctgctggcttcgcgtcgccagattaatcagttattaaactgg
cactggaaattgaagacgcaaaatagcctgccggaattaatcagcggctggcgcggtgaa
ttgatggccgatcgtcttaatgctttattagcggagtatccgcaataa
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