Kosakonia sp. CCTCC M2018092: EH164_10065
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Entry
EH164_10065 CDS
T05734
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
kot
Kosakonia sp. CCTCC M2018092
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kot03000
]
EH164_10065
Transcription factors [BR:
kot03000
]
Prokaryotic type
Helix-turn-helix
Other families
EH164_10065
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
HTH_8
AAA_lid_14
Sigma54_activ_2
GAF
AAA_5
AAA_2
HTH_30
AAA
Mg_chelatase
HTH_28
HTH_1
HTH_7
AAA_16
HTH_psq
AAA_22
HTH_22
AAA_14
HTH_29
HTH_23
Dysbindin
HTH_50
AAA_3
dnstrm_HI1420
Motif
Other DBs
NCBI-ProteinID:
AZI87379
LinkDB
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Position
complement(2105619..2107382)
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AA seq
587 aa
AA seq
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MPSRARSLSPASHEVSLPHQLEDSWQRSSRYGLTRDDDVQPWVASSLLNDARAENGWVNH
LVAPLLARLRPQLSSHPSILVLSDATGLVLETYGNSDFLHKAQRFALSPGHLWGEHARGT
NAIGTALALQRHCEVSGSEHFLSRNAGLFCSAAPVFRPDGQIAGVLDLSTPAQTPRRDAS
ALIRRAVCQIEHSWASSALGANRWLLSLHHDRAVLGSAQELLLIFEDNTLLGANRLAMEE
FSLTANHFGAMEIGTLFPGFSAKAGDCALESSHARHYYARQTLPARRYSAPRTVYQPDHM
ASEKEKALRIVNAGIALCITGETGCGKEHLARELFQRSQWHEGKFVAINCAALPEPLIES
ELFGYVPGAFTGANPKGYIGKCREADGGVLFLDEIGDMPLALQTRLLRVLQEKRVTPLGA
NSSVEVNFTLICATHQDLAARVQAGSFREDLLYRIQEFHLPIPPLRAWPHLTGFIEKLWR
ELGAARRGLTLSDEVLNALAQRPWPGNVRQLLSQLRVLMALAEDGDRITLSDLPGEPVTA
VKTEAAGQIDARQAIADAQGNMSLAAKKLGISRSTLYRRLEKEQPGR
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacgcgcccgatcgttgtcccccgcctcgcacgaggtcagcctgccgcatcaa
ctggaagattcctggcagcgcagttcacgttatggattaacccgggatgatgacgtgcag
ccctgggtggcctcctctctgctcaatgacgcccgcgcggagaatggctgggtgaaccac
ctggtcgccccactactggcgcgcctgcgcccgcaactctccagccatccgtcgattctg
gtattgtccgatgccaccggcctggtgctggagacttacggtaatagcgactttctgcat
aaagcgcagcgctttgccctctcgccgggccatttgtggggcgaacacgcgcgcggcacc
aatgccatcggcacggcgctggcattacagcgccactgcgaagtctccggcagcgaacac
tttcttagccgtaacgccgggctgttctgctccgccgcgccggtgttccgccccgatggg
cagattgccggcgtgctggatctctccaccccggcgcaaaccccgcgccgcgatgcttcg
gcgttgatccgccgcgcggtgtgccagattgaacatagctgggccagcagcgcgctcggc
gcaaatcgctggttattaagcctgcatcacgaccgggcggtgctcggcagcgctcaggag
ctgctgcttatttttgaagacaacactctgctcggcgcgaatcggctggcgatggaggag
ttttccctcaccgccaaccactttggcgcgatggagattggcaccctctttccgggattc
agtgcaaaagccggtgattgcgccctcgaatcgagccacgcgcggcactattatgcccgc
cagacgctgcccgcccggcgctacagcgcaccacgcacggtgtatcagccggatcacatg
gcgagcgagaaggagaaagcgctgcgcatcgtcaatgccgggatcgccctgtgcattacc
ggtgaaacgggctgcggcaaagagcatctggcgcgtgagctttttcagcgcagccagtgg
catgaggggaaatttgttgccatcaactgcgcggcgctgcccgagccgctgattgagtct
gaactcttcggctatgtgcccggcgcgtttaccggcgcaaacccgaagggctatatcggt
aaatgccgcgaagccgatggcggcgtgctgttccttgatgagattggcgatatgccgcta
gcgctgcaaacccgcttgttgcgggtgctgcaggagaagcgcgtgacgccgctcggagcc
aacagcagcgtggaggttaacttcacgctgatttgcgccacccaccaggatctcgccgcc
cgggtacaggccggaagcttccgcgaggatctgctctatcgcattcaggagtttcacctg
ccgatcccgccgctgcgcgcgtggccgcacctgacgggctttattgaaaaactgtggcgt
gagctgggcgctgcccgccgcgggctgacattaagcgatgaggtgctcaacgcactggca
cagcgaccctggcccggcaacgtgcgccagttattgagccagctgcgtgtgctgatggcg
ctggcggaagatggcgatcgcattacgcttagcgatcttccgggcgaaccggtcaccgcc
gttaaaacagaagccgcagggcagatcgatgcccggcaggcgattgccgatgcgcagggc
aacatgagcctcgcggcgaaaaagctgggcatttcgcgcagcacgctctaccggaggctg
gagaaggagcagccaggccgctaa
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