Kosakonia sp. CCTCC M2018092: EH164_10760
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Entry
EH164_10760 CDS
T05734
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kot03032
]
EH164_10760 (topA)
03400 DNA repair and recombination proteins [BR:
kot03400
]
EH164_10760 (topA)
Enzymes [BR:
kot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EH164_10760 (topA)
DNA replication proteins [BR:
kot03032
]
Prokaryotic type
DNA Topoisomerases
EH164_10760 (topA)
DNA repair and recombination proteins [BR:
kot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EH164_10760 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF1722
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AZI87507
LinkDB
All DBs
Position
2251391..2253988
Genome browser
AA seq
865 aa
AA seq
DB search
MGKALVIVESPAKAKTINKYLGNDYVVKSSVGHIRDLPTSGSAPKKSADSTATKPAKKPK
KDERGALVNRMGIDPWHNWDAHYEVLPGKEKVVSELKSLAEKADHIYLATDLDREGEAIA
WHLREVIGGDETRYSRVVFNEITKNAIRQAFETPGELNIDRVNAQQARRFMDRVVGYMVS
PLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWEIDAATTTPGGDTLPLQVTH
EGDKAFRPVNREQTMAAVSLLEKARYTVIDREDKPTSSKPGAPFITSTLQQAASTRLGYG
VKKTMMMAQRLYEAGYITYMRTDSTNLSQDAVSMVRSYIGDNFGKKYLPENANQYASKEN
SQEAHEAIRPSDVSVLAESLKDMEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDF
RLKARGRILRFDGWTKVMPALRKGDEDRTLPAVNKGDELTLIELTPAQHFTKPPARFSEA
SLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEENFRELMNY
DFTAQMEDSLDRVANHEAEWRNVLDSFFGDFSRQLEQAEQDPEEGGMRPNQMVLTSIDCP
TCGRKMGIRTASTGVFLGCSGYALPPKERCKTTINLIPENEVLNVLEGDDAETNALRAKR
RCQKCGTAMDSYLIDPKRKLHVCGNNPTCDGYEIEEGEFRIKGYDGPIVECEKCGSEMHL
KMGRFGKYMACTNDDCKNTRKILRNGEVAPPKEDPVPLPELPCEKSDAYFVLRDGAAGVF
LAANTFPKSRETRAPLVEELYRFRDRLPEKLRYLADAPQEDPNGNKTIVRFSRKTKQQYV
ASEKEGKATGWSAFYIDNKWTEAKK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagctctcgttatcgttgagtccccggcaaaagccaaaacgatcaataaatat
ctcggtaatgactacgtggtgaaatccagcgtagggcatatccgtgatttgccgaccagc
ggctcagcacctaaaaagagcgcagattccaccgccaccaagccggctaaaaagcctaaa
aaggatgagcggggcgcgcttgtaaaccgcatgggcattgacccgtggcacaactgggac
gcgcattatgaagtgctgcccggtaaagagaaggtggtttccgagctgaaatccctcgct
gaaaaagctgaccacatctatctcgcaaccgaccttgaccgcgaaggggaagccattgca
tggcacctgcgggaagtgatcggtggcgatgagacacgctacagccgtgtcgtgtttaac
gaaattaccaagaatgcgattcgtcaggcctttgaaacgcctggcgagctgaatatcgac
cgtgttaatgcccaacaggcgcgccgctttatggaccgcgtggtgggttatatggtctcg
ccgctgctgtggaagaagatcgcgcgtggtttgtccgccggtcgtgtgcagtccgtcgcc
gttcgcctggtggtagagcgcgagcgcgagatcaaagcgtttgttccggaagagttctgg
gaaattgacgccgcaacgacaacgccaggcggtgatactctgccgttgcaggtgacccac
gaaggggacaaagccttccgtccggttaaccgtgagcagacgatggcggcggtcagcctg
ctggaaaaagcgcgctataccgttattgatcgcgaagataagccaaccagcagcaagcct
ggcgcgccgtttatcacttccacgctgcagcaggccgccagtacacgtctcggttacggc
gtgaagaaaaccatgatgatggcccagcgcttgtatgaagcgggttacatcacctatatg
cgtaccgactccaccaacctgagccaggacgcggtcagcatggtacgcagctatatcggc
gataattttggtaagaaatacctgccagaaaacgccaaccagtacgccagcaaagagaac
tcgcaggaagcgcacgaagcgatccgtccttccgatgtgagtgtgctggccgaatcgtta
aaagatatggaagcggacgcgcagaagctttatcagctgatctggcgccagttcgttgcc
tgtcagatgacaccggcgaaatatgactccaccacgctcaccgttggcgcgggagatttc
cgcctgaaagcgcgcggacgtatcctgcgtttcgatggctggacgaaagtgatgcctgcg
ctgcgtaagggcgacgaagatcgcaccctgccagcggtcaataaaggtgatgagctgacg
ctgattgaactgacgcctgcccagcactttactaaaccgcctgcgcgcttcagcgaagca
tcgctggtgaaagagctggaaaaacgcggtatcggccgtccgtctacctatgcctcgatc
atctcgactattcaggatcgtggctatgtgcgcgtggaaaaccgccgcttctacgcggaa
aaaatgggtgaaatcgttaccgatcgtctggaagagaacttccgcgagctgatgaactac
gactttaccgcgcagatggaagatagcctcgaccgcgtcgccaatcatgaagctgaatgg
cgcaacgtgctggacagcttctttggcgatttctcgcgtcagctggagcaggctgagcag
gatccggaagagggcggcatgcgcccgaaccagatggtgctgaccagcatcgactgccca
acctgcggccgcaagatgggtattcgtactgccagcaccggcgtcttcctgggctgttcc
ggttatgcgctgccgccgaaagagcgctgcaaaaccaccatcaacctgatcccggaaaat
gaagtgctcaacgtgctggaaggcgacgacgccgaaaccaacgcgctgcgtgccaaacgt
cgctgccagaagtgcggcacggcgatggacagctacctgatcgatccgaagcgcaagctg
catgtctgcggtaataacccgacctgtgacggctacgagatcgaagagggcgagttccgc
atcaagggctatgacggtccgatcgttgagtgtgaaaagtgtggttctgaaatgcacctg
aagatgggacgtttcggcaaatacatggcctgtaccaacgacgattgcaaaaatacgcgt
aagatcctgcgcaatggcgaagtcgcgccgccgaaagaagatccggtgccgctgcctgag
ctgccgtgcgagaaatcagacgcctatttcgtgctgcgtgacggtgcagcgggtgtcttc
ctcgcggccaacaccttcccgaaatcgcgtgaaacccgtgcgccgttggtggaagagctc
tatcgcttccgcgatcgcctgccggagaagctgcgctatctggctgatgcgccgcaggaa
gatccgaacgggaataaaaccatcgtgcgttttagccgtaaaactaagcagcagtacgtc
gcctctgagaaagaggggaaagctaccggctggtccgctttctatatcgacaacaaatgg
actgaagcgaaaaagtaa
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