Kosakonia sp. CCTCC M2018092: EH164_18140
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Entry
EH164_18140 CDS
T05734
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03030
DNA replication
kot03430
Mismatch repair
kot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EH164_18140
03430 Mismatch repair
EH164_18140
03440 Homologous recombination
EH164_18140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kot03032
]
EH164_18140
03400 DNA repair and recombination proteins [BR:
kot03400
]
EH164_18140
Enzymes [BR:
kot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EH164_18140
DNA replication proteins [BR:
kot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EH164_18140
DNA repair and recombination proteins [BR:
kot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EH164_18140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AZI88848
LinkDB
All DBs
Position
complement(3809821..3813303)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGSPALAITDFTNLCGLVKFYGTAHGA
GIKPIVGADFHVQCDLIGDELTQLTVLAANNTGYQNLTLLISRAYQRGYGAAGPYIDRDW
LIELNEGLILLSGARMGDVGKSLLRGNSALVEQCLDFYKTHFPDRYYLELIRTGRQDEEN
YLHAAVALAEAQGLPVVATNDVRFLEEGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RNEEEMCELFSDIPEALENSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVVKSKEGL
EERLEFLFPDPAVRAEKRPPYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKQGEPPLDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVQLEGERETLGLY
LTGHPINQYLKEIERYVGGYRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRTDARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcatagcgactactccatgattgacggg
ctggcgaaaaccgggccgctggtgaagaaggcggccgcccttggctcgcccgcgctggcg
atcactgatttcaccaacctctgcggtctggtgaagttctacggaacggcgcacggcgcc
gggatcaagcccatcgtcggcgctgacttccacgtgcagtgcgatctgattggtgacgag
ctgacgcagcttaccgtcctcgccgccaacaataccggctaccagaacctgacgctgctg
atttctcgcgcctaccagcgcggctacggcgcggcgggcccttatatcgatcgcgactgg
ctaattgagcttaacgaagggctgatcctgctttccggcgcgcgaatgggcgacgtcggc
aaaagcctgctgcgcggtaacagcgcgctggtcgagcagtgcctcgatttctataaaacc
catttcccggatcgctactatctggagctgatccgcaccggtcgtcaggacgaagagaac
tacctgcacgcggcggtcgcgctggcggaagcgcaggggttgccggttgtcgccaccaac
gacgtccgcttcctcgaagagggcgactttgacgcccatgaaattcgcgtcgccatccac
gacggctttaccctcgacgatcccaaacgcccgcgtaactactcgccgcagcaatatatg
cgcaacgaagaggagatgtgcgaactcttctccgatattccggaagcgctggaaaacagc
gtcgaaattgctaaacgctgtaacgtcaccgtgcgcctcggcgagtacttcctgccgcag
ttcccgaccggggatatgaccactgaagatttcctggttgtgaaatcgaaagaggggctg
gaagagcgactcgaattcctcttccccgatccggcagtgcgcgccgagaaacgcccaccc
tacgatgagcgccttgatattgagctccaggttattaaccagatgggcttcccgggctac
ttcctgatcgttatggagtttatccagtggtcgaaagataacggcgtgcccgttgggcct
ggccgtggttccggtgccgggtcgctggttgcctatgcgctgaagatcaccgatctcgat
ccgctggagtttgacctgctgttcgaacgtttccttaacccggaacgtgtctcgatgccc
gacttcgacgtcgatttctgcatggagaaacgtgaccaggtaatcgaacacgtggcggat
atgtatggccgcgacgcggtgtcgcagatcatcacctttggtaccatggcggcgaaagcg
gttatccgcgacgttggtcgcgtgctgggccacccctatggctttgtcgaccgtatctcc
aaactggtgccgcccgatccgggcatgacgctggcaaaagcctttgaagcagagccgcaa
ctgccggagatctacgaagccgatgaagaggtgcgggcgctgatcgacatggcgcgcaag
ctggaaggggtcacgcgtaacgccggtaaacatgccggtggtgtggtgatcgcgccaacc
aaaattactgactttgcaccgctttactgcgatgaagccgggcagcatccggttacccag
tttgataagaacgatgtggaatacgcgggcctggtgaagttcgacttcctcggcttgcgt
acgctgaccatcatcaactgggcgctggagatgatcaacgcccggcgcgagaagcagggc
gagccgccgctggatatcgccgccattccgcttgaagacaagaagagctttgacatgctg
caacgctcggagaccacggcggtcttccagcttgaatcccgcggcatgaaggatctgatt
aagcgtctgcagccggactgcttcgaagatatgatcgcactggtggcgctgttccgcccc
ggtccgctgcagtcgggcatggtagataactttatcgaccgtaaacacggacgcgaagag
atctcctacccggacgtgcagtggcagcacgagagcctgaaaccggtgctggagccgacc
tacggcattatcctgtatcaggaacaggtaatgcagattgcccaggtgctctccggttat
accctcggtggcgcggatatgctgcgtcgtgcgatgggtaagaagaagccggaagagatg
gccaagcagcgctccatttttgaagatggcgcgaagaaaaacggtattgacggcgagctg
gcgattaaaatctttgacctggtagagaaattcgccgggtatggatttaacaaatcgcac
tccgccgcctatgctttggtttcctatcagaccctgtggctgaaagcgcactatccggcc
gagtttatggcggcggtaatgactgccgatatggacaacaccgagaaagtggtcgggctg
gtggatgagtgctggcgcatggggctgaagatcctgccgccggacattaactccgggctc
taccacttccacgtcaacgacgacggcgagatcgtctacggtattggcgcgatcaaaggc
gtgggcgaagggccgattgaagcgatcatcgaagcgcgtaacaacggcggctatttccgc
gagctgttcgatctctgtgcgcgtaccgatatcaaaaagcttaaccgccgggtgctggaa
aagctgattatgtccggggcgttcgaccgccttggcccgcaccgcgccgcgctgatgaac
tcgctgggcgatgcgctgaaagccgccgatcagcacgcgaaagcggaggcgatcggccag
gcggatatgttcggcgtgctggcggaagagccggagcagattgagcaatcctacgccagc
tgccagccgtggccggagcaggttcagcttgagggcgagcgggagacgttggggctttac
ctgacgggacacccgatcaaccagtatttaaaagagatagagcgctatgtcggaggctac
aggctgaaagacatgcatccgaccgaacgtgggaaggtcaccacggcggccgggctcgtc
attgctgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgttggat
gaccgttccgggcgtcttgaagtgatgttgttcactgacgcgctggataaataccagcag
ttgctggaaaaagaccgcatactcatcgtcagcggacaggtcagctttgatgacttcagc
ggtgggcttaaaatgaccgcccgtgaagtcatggacattgacgaggcccgtgaaaaatat
gcccgcgggcttgctatatcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacatctctattaccag
aggacggatgcgcgcgcgcggttacgctttggcgcaacctggcgtgtctctccgagcgat
cgtttacttaacgatctgcgtggcctcattggttcggagcaggtggaactggagtttgac
taa
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