Kosakonia sp. CCTCC M2018092: EH164_19260
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Entry
EH164_19260 CDS
T05734
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot02020
Two-component system
kot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EH164_19260
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EH164_19260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kot03021
]
EH164_19260
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
kot02035
]
EH164_19260
Transcription machinery [BR:
kot03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EH164_19260
Bacterial motility proteins [BR:
kot02035
]
Flagellar system
Flagellar assembly proteins
Stator
EH164_19260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
UPF0122
HTH_23
UPF0175
HTH_38
Motif
Other DBs
NCBI-ProteinID:
AZI89054
LinkDB
All DBs
Position
complement(4059281..4059976)
Genome browser
AA seq
231 aa
AA seq
DB search
MMNLTAAKTLNPADEARYISDYLPLVHKVVKQFSWQTSSVMSKEDMRQIALMGLLASLRR
YGPPDAQFAGYAIQRIRGAVLDELRQQDWRPRRLRQQTHKLTDAIREITRELGYEPRFEE
LSERLSVTPEAWQQYLLLHSASALESLDNLLESDLHASALYSRQLEDELLPAYTLRSAVA
SLDKREQLILALYYQHELSLKEIAQVIGVSEARVCQLNKVIAQKVQAFTRQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttaactgccgcaaaaaccttaaatcccgctgatgaagcgcgttatatcagt
gattatttgccgctggtacataaagtcgtcaaacagttcagctggcagaccagcagcgta
atgagcaaagaggatatgcggcagattgccctgatggggttgctggcctcgctgcgccgc
tatggcccgccggacgcgcagttcgccggttacgccattcagcgtattcgcggcgcggtg
ctggatgagttacgccagcaggactggcggccgcgcaggctgcgtcaacagacgcataag
ctgacggatgcgatccgcgagatcacccgtgagctggggtatgagccgcgctttgaggag
ctgagtgaacggctgtcggtgacgccggaagcctggcagcaatatctgctgctgcactcg
gccagtgcgctggagagcctggataacctgctggagagcgatctgcacgccagcgcgctc
tatagccgccagctcgaggatgaactgcttcccgcctacacgttacgcagcgcggtagcc
agcctcgacaagcgtgagcagctgatcctcgcgctctattaccagcatgaactgagcctg
aaagagattgcgcaggtgatcggcgtatcggaagcgcgtgtttgccagcttaataaagtg
attgcccagaaggttcaggcgtttactcgtcaataa
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