Kosakonia sp. CCTCC M2018092: EH164_20210
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Entry
EH164_20210 CDS
T05734
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EH164_20210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kot03019
]
EH164_20210
03009 Ribosome biogenesis [BR:
kot03009
]
EH164_20210
Messenger RNA biogenesis [BR:
kot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EH164_20210
Ribosome biogenesis [BR:
kot03009
]
Eukaryotic type
Pre-60S particles
RNases
EH164_20210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AZI89229
LinkDB
All DBs
Position
complement(4286571..4287116)
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AA seq
181 aa
AA seq
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MSANENNLIWIDLEMTGLDPERDRIIEIATLVTDANLNILAEGPVMAVHQSDAQLALMDE
WNVRTHTGSGLVERVKASTFDDRAAELATIEFLKEWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEVLTGLKKQNTHQALDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaaatgaaaacaacctcatttggattgatctcgaaatgacgggcttagatccc
gagcgcgatcgcattattgagatcgcgacactggtgaccgacgccaacctcaatatcctg
gcggaagggccggtgatggcagtgcatcaatccgacgcgcagctggcgttgatggatgag
tggaacgtgcgaacccacaccggcagcggcctggttgaacgcgttaaagcgagcaccttt
gacgatcgcgcggcggagctggcgacgattgagtttctgaaagagtgggtaccggccggt
aaatcgcccatttgcggcaacagcatcggccaggatcgccgtttcctgtttaagtacatg
ccggagctggaagcctacttccactatcgctacctggatgtcagcaccctgaaagagctg
gcgcgccgctggaaaccggaagtgctgaccggcctgaaaaagcagaatactcaccaggcg
ctggatgatattcgcgaatcggtggcggagctggcttactaccgcgaacactttattaaa
ctgtaa
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