Kosakonia sp. CCTCC M2018092: EH164_21390
Help
Entry
EH164_21390 CDS
T05734
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH164_21390 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kot03019
]
EH164_21390 (recQ)
03400 DNA repair and recombination proteins [BR:
kot03400
]
EH164_21390 (recQ)
Enzymes [BR:
kot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EH164_21390 (recQ)
Messenger RNA biogenesis [BR:
kot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH164_21390 (recQ)
DNA repair and recombination proteins [BR:
kot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EH164_21390 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
Helicase_C
DEAD
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AZI89437
LinkDB
All DBs
Position
complement(4545998..4547824)
Genome browser
AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQQDIIDTVLGGRDCLVVMPTGGGKSLCYQIP
ALVLEGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQNREQQLEVVNGCRNGQIRLLY
IAPERLMLDNFLDQLRQWNTVLIAVDEAHCISQWGHDFRPEYAALGQLRHMLPNVPFMAL
TATADDTTRRDIERLLSLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKCGI
IYCNSRAKVEDTAARLQARGFSAAPYHAGLENEVRARVQEQFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRHAPCGNCDICLDPPRQYDGLQDAQKAL
SAIYRVNQRFGMGYVVEVLRGANNQRIREMGHDKLPVYGIGREQSHEHWVSVIRQLIHLG
FAMQNIAQHSALQLTEAARPVLRGEVPLMLAVPRMVTLKPKVMQKAAVGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGDMLSVNGVGTRKLERFGQEFMALIR
AHVDGDEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggttttacaagagacc
tttggctaccagcagttccgccctggccagcaggatattatcgacaccgtgcttggcggt
cgcgactgcctggtggtgatgccgaccggcggcggcaaatccctctgttatcaaattccg
gcgctggtgctggaagggctgacggtggtggtctcgccgcttatctcgctgatgaaagat
caggtcgaccagttgctcgccaacggcgtagcggcggcctgtctcaactcgacccagaat
cgcgagcagcagctcgaggtggtaaacggctgtcgcaacgggcagatccgtctgctctat
atcgcgcctgagcgcctgatgctcgacaacttccttgatcagctgcgccagtggaacacg
gtgcttattgccgtcgatgaagcgcactgtatctcccagtgggggcacgatttccgcccg
gaatacgccgcgctcggccagctgcgccatatgctccccaacgtgccctttatggcgctt
accgccaccgccgatgacaccacgcggcgcgatattgaacgcctgctcagccttaacgat
ccgctgattcaggtcagcagtttcgaccgtccaaacatccgctacatgctgatggagaag
tttaagcctctcgatcagctgctgcgctatgtgcaggagcagcggggcaaatgcggcatc
atttactgtaacagccgggcgaaagtggaagataccgccgcgcgcttacaggcccggggc
ttcagcgccgcgccttatcacgccgggctggaaaacgaggttcgcgcgcgggtgcaggag
cagttccagcgcgatgacctgcaaattgtggttgctaccgtcgcctttggcatggggatt
aacaaacccaacgtccgctttgtggtgcacttcgacatcccgcgcaatatcgaatcctac
taccaggagaccggccgcgccgggcgtgatggcctgcccgcagaagcgatgctgttttac
gatccggcagatatggcctggctgcgccgctgcctggaggagaagcccgccgggccgttg
caggatatcgagcgtcacaagctcaatgcgatgggagcctttgctgaagcgcaaacctgt
cgtcgcctggtgctgctcaactactttggcgaagggcgtcacgcgccttgcggcaactgc
gatatctgcctcgatccgccgcgccagtacgacggtttgcaggatgcgcagaaagcgctc
tccgccatctatcgcgttaaccagcgcttcgggatgggttatgtggttgaggtgctgcgc
ggcgcgaataaccagcgtatccgcgagatgggccatgacaagctgccggtctacggcatc
gggcgcgagcagagccacgaacactgggtaagcgtgattcgccagctgatccacctgggc
ttcgccatgcaaaatatcgcccagcactcggcgctgcaactgacggaagcggcgcgtccg
gttctgcgcggtgaggtgccgctgatgctggcggtgccgcgcatggtaacgctgaagccg
aaggtgatgcagaaggcggcggtcggcaattacgatcgcaagctgttcgccaaactgcgt
aagctgcgtaaagcgattgccgacgaagagaacatcccgccgtacgtggtgtttaacgat
gccacgctgattgagatggcggagcagatgccgctttcgccgggcgatatgctgagcgtc
aacggcgtcggcacgcgcaaactggagcgtttcggccaggagtttatggcgctgatccgc
gcccatgtcgacggcgatgaagagtag
DBGET
integrated database retrieval system
