Kosakonia sp. CCTCC M2018092: EH164_21575
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Entry
EH164_21575 CDS
T05734
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
kot
Kosakonia sp. CCTCC M2018092
Pathway
kot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EH164_21575 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kot03019
]
EH164_21575 (rhlB)
Enzymes [BR:
kot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EH164_21575 (rhlB)
Messenger RNA biogenesis [BR:
kot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EH164_21575 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
CCDC138_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZI89469
LinkDB
All DBs
Position
4581744..4583015
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AA seq
423 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPKVIEALETKGFHNCTPIQALALPLTLAGRDVAGQAQTGTGKT
MAFLTSTFHYLLSHPAIEDRKVNQPRAIIMAPTRELAVQIHADAEPLAQSTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRMIDYTKQNHINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPATDQRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPEQKTGHRIKEELFYPSN
DEKMRLLQTLIEEEWPDRAIVFANTKHRCEQIWGSLAADGHRVGLLTGDVAQKKRLRILD
EFTRGDLDILVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGASGNSISLA
CEEYALNLPAIETYIGHSIPVSKYNPDALLSELPPPKRLTRSRPANGPRRSGGGAPRNRR
RSG
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacatttaacagaacagaagttttccgacttcgccctgcacccaaaagtg
atagaagcccttgaaactaaaggctttcataattgcacgcctattcaggctctcgccctt
ccgctgacgctggcgggtcgtgatgttgcaggtcaggcgcaaaccggtaccggtaaaacg
atggcgtttttaacgtcaacgtttcattatctcctctctcaccctgcaatcgaagaccgt
aaagttaaccagccgcgcgcgattatcatggcgccgacacgtgaacttgcggtgcaaatt
cacgccgatgcagagccgctggcacagtcgacagggctgaagctgggtctggcttacggc
ggtgatggctacgacaaacagctgaaagtgctggaaagcggcgtcgatattcttatcggc
accacgggtcgtatgatcgattacaccaaacagaaccatattaacctgggcgcgattcag
gtcgtggtgctggacgaagccgatcgtatgtacgatctgggctttattaaagatatccgc
tggctgttccgccgtatgccggcaaccgatcagcgcctcaatatgctcttctccgctacg
ctctcctaccgcgtgcgtgaactggcattcgagcagatgaacaacgcagaatatgttgaa
gtggaaccggaacagaaaaccggccaccgcattaaagaagagcttttctacccgtctaac
gacgagaaaatgcgtctgctgcagaccctgattgaagaagagtggccggatcgcgccatt
gttttcgccaataccaaacaccgctgtgagcagatctggggcagcctggccgccgatggt
catcgcgttggcctgctgacgggcgacgtggcgcagaagaaacgcctgcgtatcctggat
gagttcacccgtggcgatctcgatatcctggttgcgaccgacgtcgcagcgcgtggcctg
cacattccggctgtaacgcacgtctttaactacgatctgccggatgattgcgaagattac
gttcaccgtatcggccgtaccggtcgcgcgggtgccagcggcaactcgatcagccttgcg
tgtgaagagtacgcgctgaacctgccggcaattgagacctacattggtcactccatcccg
gtcagcaaatataacccggatgcgctgctcagcgagctgccgccgccgaagcgcttaacg
cgttctcgcccggctaatggtccgcgccgtagtggtggtggcgcgccgcgtaatcgtcgt
cgttcaggttaa
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