Kosakonia sp. MUSA4: C0557_01530
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Entry
C0557_01530 CDS
T09986
Symbol
treR
Name
(GenBank) HTH-type transcriptional regulator TreR
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
kou
Kosakonia sp. MUSA4
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kou03000
]
C0557_01530 (treR)
Transcription factors [BR:
kou03000
]
Prokaryotic type
Helix-turn-helix
LacI family
C0557_01530 (treR)
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GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_31
HTH_23
HTH_IclR
HTH_7
Peripla_BP_4
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_AraC
CENP-B_N
HTH_Crp_2
HTH_26
MarR
HTH_28
HHH
TrmB
Motif
Other DBs
NCBI-ProteinID:
QJT78851
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Position
complement(326394..327341)
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTREKVEAIVNQHGFSPSRSARAMRGQ
SDKVVAIIVSRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPELVGEHLQMLSHRNID
GVVLFGFTGITEELLASWQSSLVLLARDANGFSSVCYDDEGAIQLLMEKLYAQGHRHISF
IGVPHSDVTTGKRRHDAYLACCQQYQIEPLSVLPGLAMKQGYDHVAEVLTPQTTALLCAT
DTLALGASKYLQQQRIENLQLASVGNTPLMKFLHPEIVTVDPGYAQAGRQAAAQLIEQVN
GRADLRQIVIPAKLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctgacaatcaaagacattgcgcgcttaagcggagtggggaaatccacc
gtttcccgcgtgctgaataatgaaagcggcgtgagccagcggacgcgcgaaaaagtggag
gccatcgtcaatcaacacggcttctccccttcccgttccgcacgcgccatgcgcgggcaa
agcgacaaagtggtggcgattatcgtctcgcgtctcgattccctgtcggaaaacctggcg
gtgcagaccatgctccccgccttctacgaacagggttacgacccgatcatgatggagagc
cagttttcgccggaactggtcggcgagcatttgcagatgctgagccaccgcaatatcgac
ggcgtcgtgctgtttggttttaccggcattaccgaagagttgctggcctcctggcagtca
tcgttagtgctgctggcgcgcgacgcgaacggtttttcttcggtgtgttacgacgacgaa
ggcgccattcaactattgatggaaaaactctacgctcagggtcatcgccatatcagcttt
atcggcgtgccgcacagcgatgtcacgaccggtaaacgccgccacgatgcttatctggca
tgctgccagcaataccagattgaaccgctctccgtgctgccgggccttgccatgaagcag
ggttacgaccatgttgctgaagtgctgacgccgcaaaccaccgcgctactgtgcgctacc
gatacgctggcgctgggtgccagcaaatacttgcagcaacagcgcatcgaaaacctgcaa
cttgcaagcgtaggtaatacgccgttgatgaagttcctgcatccggaaattgttaccgtc
gatcccggctatgcccaagcaggccgccaggccgctgcccagttaatagaacaagttaat
ggtcgcgctgatttacggcaaattgtgatccccgccaaactcgcctga
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