Kosakonia sp. MUSA4: C0557_03795
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Entry
C0557_03795 CDS
T09986
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kou
Kosakonia sp. MUSA4
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kou03009
]
C0557_03795
Enzymes [BR:
kou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C0557_03795
Ribosome biogenesis [BR:
kou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C0557_03795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
MTS
Methyltransf_11
RrnaAD
Methyltransf_4
TRM5-TYW2_MTfase
Cons_hypoth95
Methyltransf_15
Methyltransf_12
FtsJ
CMAS
Methyltransf_23
Methyltr_RsmB-F
MetW
TPMT
Ubie_methyltran
Methyltransf_32
Ribosomal_L22
TehB
Motif
Other DBs
NCBI-ProteinID:
QJT79246
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Position
791637..792938
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AA seq
433 aa
AA seq
DB search
MAQFYSAKRRVTTRERITVTVTDLDPFGQGVARHNGKALFIPGLLPEETAEITLKEEKRQ
FARGEVKRRLNDSPERVKPACPHFGVCGGCQQQHASIALQQRSKSAALARLMKQDIDEVI
AAQPWGYRRRARLSLSWQPKTQRLEMGFRKAGDSDIINVTRCPVLVPRLEAMLVPLHECL
AELGAVRHLGHVELVEADNGPLMVLRHTAPLSHADKEKLERFSHSQGIALYLAPQSEILE
HVSGESPWYSSDGLRLMFSPRDFIQVNDGVNQQMVTHALAWLDIQPGDRVLDLFCGMGNF
TLPLAQRALSVVGVEGVADLVAKAQENAQQNGLQNVTFFHENLEDDVTQQPWASQGFDKV
LLDPARAGAAEVMQHIIKLSPGRVVYVSCNPATLARDSEALLNAGYQIQRLAMLDMFPHT
GHLESMVLFVKNK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacgacgcgtgacgactcgtgagcgcattaccgtcacg
gtaaccgacctcgatccctttggtcagggtgttgctcgccataatggtaaggcgttgttt
attcccggattattaccagaagaaacggcggaaattaccctcaaagaggaaaaacgtcag
tttgcccgtggggaagtaaaacgtcgcctgaatgacagcccggagcgcgtgaaaccggca
tgtccgcattttggcgtttgcggcgggtgccagcagcaacatgccagcattgccctgcaa
cagcgcagtaaaagcgcggcgctggcgcgattgatgaagcaggacattgacgaggtgatt
gccgcacagccgtggggatatcgccgtcgggcgcgtttgagcctcagctggcagccgaaa
acgcagcgtctggagatggggtttcgcaaagcgggcgacagcgacattatcaatgtgacg
cgttgcccggtactggtgccccgtcttgaggcaatgctggtgccgctgcacgaatgtctg
gcggagcttggtgccgtgcgccatctggggcacgtcgaactggtggaggccgacaatggc
ccactgatggttttgcggcacacggcgccattaagtcacgcggataaagaaaaactggaa
cgtttttcgcattctcaggggattgcgctgtacctcgcgccacaaagcgagatacttgaa
cacgttagcggagaatccccctggtacagctccgacgggctacgcttaatgttcagcccg
cgggactttattcaggtcaacgatggcgttaatcagcaaatggtgacccatgcgctggcg
tggcttgatatccagcccggcgaccgtgtactggatctgttctgcggtatgggaaatttc
actctgccgctggcgcagcgcgcgttaagtgtcgttggggtggaaggcgtcgccgatctg
gtggcgaaagcgcaggagaatgcgcaacagaatggcttgcagaatgtgacattctttcat
gaaaatctggaggatgatgtcactcagcaaccctgggcgagccagggatttgataaggtg
ttgctcgatcccgcgcgtgctggtgctgccgaagtgatgcaacatattataaaattgtct
cccggcagagtggtgtacgtttcctgtaaccccgccacgcttgcccgtgacagtgaagcg
ctattaaatgcaggttaccagattcagcggctggcgatgctggacatgtttccacacact
ggccatctggaatcgatggtgttgtttgtgaaaaacaaatga
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