Kosakonia sp. MUSA4: C0557_06025
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Entry
C0557_06025 CDS
T09986
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
kou
Kosakonia sp. MUSA4
Pathway
kou00040
Pentose and glucuronate interconversions
kou01100
Metabolic pathways
kou02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
C0557_06025
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C0557_06025
Enzymes [BR:
kou01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
C0557_06025
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Motif
Pfam:
Pectate_lyase_2
GlcNAc_2-epim
Beta-AFase-like_GH127_cat
Motif
Other DBs
NCBI-ProteinID:
QJT79659
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Position
complement(1248877..1250586)
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AA seq
569 aa
AA seq
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MKLSKITLTLTMLSTFSCAAIAQESARLSSVKAFADTVMAKAAAQNQPNVPLLADGVDPR
TGKQMEWIFPDGKTAVLSNFSAQQNLMRVLVGLSNLSGEAKYKKLAEDNVRYYFRHYQDK
SGLLLWGGHRFIDLNTLQPEGPSEKEKVHELKNAYPYYDLMFAVDKPATERFIRAFWNAH
VYDWKILETSRHGEYDKAMGKLWNSEFEQQPPFFATKGLSFLNAGNDLIYSASLLYQHDG
DKGALTWAKRLAEQYVLPRDKKTGLGVYQFTQALKRAETSDDSDTNSKYGDRAQRQFGPE
FGADALEGNMMLKGRTSTLYSENALMQLALAKSLGHDGDDIKKWTLDGLKAFAKYAYDAN
SNTFRPMLANGSDLSGYTVKRDGYYGKKGTVLKPYPAGNEFLLSYARAWTLEPDTEIWKV
ARGVARSQGLGDIGEPGGKNHKLDLNTQNSEPYAIFALIDLAQATGDKSYLTLADKVADN
ILAHKRLNGFFVDDQQYIYANIDNIAPYALLALEAAMRGKPDAVAPFLNGAGFTEGAYRL
DDGTVRYSTRDDELFKLKPGEQLKPNGKK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtcaaaaataacgctgacattaacgatgttgagtactttctcctgcgcggcc
attgcgcaagagagcgcgcgcctgagcagcgtcaaagcctttgccgacacggtgatggcg
aaggccgccgcgcaaaaccagcctaacgtgccgttactggccgatggcgttgatccgcgc
accggcaagcagatggaatggatcttcccggatgggaaaaccgcagtgctgtcgaatttt
tctgcgcagcagaacctgatgcgcgtgctggttgggttaagtaatctgagcggcgaggca
aaatacaaaaagctggccgaagataatgttcgctactatttccgccattatcaggacaag
agcgggctgctgctgtggggcgggcaccgctttatcgatctcaacacgctgcaaccggaa
gggccaagcgagaaagagaaggttcatgaattaaagaacgcctacccctactatgacttg
atgtttgccgttgataaaccggcgaccgaacgttttatccgtgcgttctggaatgcgcat
gtttacgactggaagatcctggaaaccagccgccacggagaatacgacaaagcaatgggc
aaactgtggaacagcgagtttgaacaacagccgccgttctttgccaccaaaggcctgagt
ttcctcaatgccgggaacgatctgatctactccgcctcgctgctctatcaacacgatggt
gacaaaggcgcgctcacctgggcaaaacggctggcggaacagtatgtcctgccgcgcgat
aaaaagaccggattgggcgtttatcaatttacccaggcgttaaaacgcgctgaaaccagc
gacgacagcgataccaactccaaatatggcgaccgcgcacagcgccagtttggcccggag
tttggcgcggatgcgctggaaggcaatatgatgctgaaaggtcgcaccagcacgctctat
tcggaaaacgcgctgatgcaactggcgctggcgaaatctctcggacacgacggggatgac
atcaaaaaatggacgctggatggcctgaaagctttcgccaaatatgcctatgacgcgaac
agcaacaccttccggccaatgctggcaaacggcagcgatttgtcgggttataccgtgaaa
cgtgacggctactacggcaaaaaaggtaccgtgctgaagccctatccggcaggcaatgaa
ttcctgctctcttacgcccgcgcctggacgctggagccggatacagagatatggaaagtg
gcgcgcggggttgcccgtagccaggggctgggtgatatcggcgaacccggaggcaaaaac
cacaaactggatctcaacacgcaaaacagcgagccgtacgccatctttgcgctgatcgat
ctggcgcaggcaaccggcgataaaagctacctcacgctggcggataaagtggcggacaac
attcttgcccacaaacgcctgaatggctttttcgtcgatgatcagcagtatatttacgcc
aatatcgacaatatcgccccttatgccttgctggcgctggaagcggcgatgcgcggtaaa
ccggatgcggtggcaccgttcctcaatggcgcagggtttaccgaaggcgcataccggctg
gatgatggtacggtgcgctactccacgcgcgacgacgagttgttcaaactcaagccgggc
gagcagttaaaacctaacggtaaaaagtga
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