Kosakonia sp. MUSA4: C0557_07480
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Entry
C0557_07480 CDS
T09986
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kou
Kosakonia sp. MUSA4
Pathway
kou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0557_07480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kou03019
]
C0557_07480
Enzymes [BR:
kou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C0557_07480
Messenger RNA biogenesis [BR:
kou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0557_07480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QJT79918
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All DBs
Position
1534234..1535679
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AA seq
481 aa
AA seq
DB search
MSFDALGLNPEILRAIAEQGYVQPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QLLVQKEPHAKARRPVRALILTPTRELAAQIGENVRDYSQYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNALKLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPQR
RQNLLFSATFSDEIKALAEKLLHNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGITSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIEGYEPDPSIKAEPIQNGRGQGGGRQGGGRGQGGGGRGQSAPRRNEGE
EQKPRSPRRTDGEAQKPRAPRRSEGGSRRLDGNAQPARDGQGKPAGNGARRRRPRKPTAA
Q
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgatgcccttggcctgaatccggaaatcctgcgcgcaatcgccgagcagggc
tatgttcagccgacccctatccagcagcaggcgatccccgccgtactgcaaggccgcgac
ctgatggccagcgcccagaccggtaccggtaaaacggccggtttcaccctgccgttgctg
caactgctggtgcaaaaagagccgcacgcgaaagctcgtcgcccggtgcgtgcgctgatc
ctgacgccaacccgtgaactggcggcgcaaatcggtgaaaacgtgcgcgattacagccag
tatctgaacatccgttcgctggtggtgtttggcggcgtcagcatcaacccgcagatgatg
aaactgcgcggtggcgttgatgtgttggtggctacgcctggccgtttgctcgatctggaa
caccaaaatgcgctgaaactcgatagcgtggaaattctggtgctggatgaagccgaccgc
atgctggatatgggctttatccacgatattcgccgcgtgctggcaaaactgccgcagcgt
cgtcagaacctgctgttctccgcgaccttctccgacgagatcaaagcgctggcggaaaag
ctgctgcacaacccgctggaaattgaggtggcgcgccgcaacaccgcttccgagcaggtg
acgcagcatgtgcattttgtagataaaaaacgtaagcgtgaactgttgtcgcagatgatt
ggccagggtaactggcaacaggtgctggtctttacccgcaccaaacacggcgctaaccat
ctggcggaacaactgaataaagatggcatcaccagtgcggcgatccacggtaacaagagc
cagggcgcgcgtacccgtgcgctggcagatttcaaatccggggatattcgcgtgctggtg
gcaacggatatcgccgcgcgcggtctcgacatcgaagagttgccgcacgtggtgaactat
gagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccgggcgtgcggcg
gctaccggtgaagcgctgtcgctggtctgcgttgatgaacacaaactgctgcgcgacatt
gaacgtctgctgaaaaaagagatcccgcgcattgccatcgaaggctatgagccggatccg
tcaatcaaagccgaaccgatccagaatggtcgcggccagggcggcggtcgtcagggtggt
ggtcgcgggcagggcggcggtggtcgtggtcagtccgcgccgcgccgcaatgagggtgag
gagcagaaaccgcgctccccgcgtcgcactgacggtgaagcgcaaaaaccacgtgctcca
cgccgcagtgaagggggttcacgccgtctggatggtaacgcccagcctgcgcgtgacggc
cagggtaaaccggcaggaaacggcgcacgccgtcgccgtccgcgtaaaccgactgccgcg
cagtaa
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