Kosakonia sp. MUSA4: C0557_09260
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Entry
C0557_09260 CDS
T09986
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kou
Kosakonia sp. MUSA4
Pathway
kou03030
DNA replication
kou03430
Mismatch repair
kou03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C0557_09260 (holB)
03430 Mismatch repair
C0557_09260 (holB)
03440 Homologous recombination
C0557_09260 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kou03032
]
C0557_09260 (holB)
03400 DNA repair and recombination proteins [BR:
kou03400
]
C0557_09260 (holB)
Enzymes [BR:
kou01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C0557_09260 (holB)
DNA replication proteins [BR:
kou03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C0557_09260 (holB)
DNA repair and recombination proteins [BR:
kou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C0557_09260 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
FimL_2nd
OHCU_decarbox
Motif
Other DBs
NCBI-ProteinID:
QJT80249
LinkDB
All DBs
Position
1931198..1932202
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPDFEQLVASYQSGRGHHALLVHALPGMGEDALIYALSRFLLCQTPEGHKSCG
HCRGCQLMQAGTHPDYYLLAPEKGKTTLGIDAVREVSEKLYEHARLGGAKVVWIQDAALL
TDAAANALLKTLEEPPAQTWFFLACREPARLLATLRSRCRLHHLAPPAESYASAWLSREV
TTSQEAILSALRLCAGSPGAAEALLQEEHWAQRQALCQAVENALNSGDWFAMLAALSHDR
VAERLQWVCALFLDALKVQQGATLLTNVDVPDLVHSLARQLRSETLHALLHAVFTCREQL
LNVVGVNRELLLTDLLLTLERYLQPGATLPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccgtggctgcgaccggactttgaacaactggtcgccagttatcaaagc
ggacgcgggcaccacgcgttactggttcacgcgctgccaggtatgggggaagacgcgctg
atctatgcgctcagccgttttctgctgtgtcaaacgccggaagggcacaaaagctgcggc
cactgtcgcggctgtcagttaatgcaggccggaacccacccggattattacctactggcg
ccggaaaaaggcaaaacgacgttgggcattgatgcggtgcgtgaagtgagtgaaaaactc
tacgagcatgcacgtcttggcggggcgaaagtggtctggattcaggatgccgcgttatta
accgatgctgccgccaatgcattactgaaaacgctggaggagccaccggctcagacgtgg
ttctttcttgcctgccgggaacccgcgcggttactggcgacgttgcgcagccgctgtcgc
ttgcatcaccttgcgccaccggcggaaagttatgccagcgcatggcttagtcgggaagtg
acaacgtcacaagaggctattctcagcgcgttgcgtctgtgcgccggctcgccaggcgcg
gctgaagcgctgttgcaggaagagcactgggcgcagcgtcaggcgctctgtcaggcggtt
gaaaacgcgctgaatagtggcgactggttcgccatgctggcggcgcttagccacgatcgg
gtggcagaacgtttgcaatgggtctgtgcgctattccttgatgctctgaaagtacagcag
ggggcgacgttgctgaccaacgttgatgtgccggacctggtacacagccttgcccgtcag
ttacgcagtgagacattacatgctctgctgcatgccgtatttacttgccgtgagcagttg
ctgaatgtcgtgggagtgaaccgcgaactgctgcttaccgatcttttgttaacactggaa
cggtacctgcaaccaggcgctacgcttccggtatcccacctttaa
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