Kosakonia sp. MUSA4: C0557_13050
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Entry
C0557_13050 CDS
T09986
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kou
Kosakonia sp. MUSA4
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kou03016
]
C0557_13050
Enzymes [BR:
kou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C0557_13050
Transfer RNA biogenesis [BR:
kou03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C0557_13050
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
QJT80933
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All DBs
Position
2708907..2710841
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDKI
IAVIHSDKDRESAEPEELVEPFLTRFVGKVQKKDDRLSIVPDHPLLKDAIPCRAARGVEH
DFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFAEDHFVPWWVTLARHNLEKEAPDGVAT
EMLDDGLQRVDLTALDFVTIDSASTEDMDDALFVEETADGKLQLTVAIADPTAWIAEGSK
LDDSAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEIRPALVCRMTLDDEGSIEENIEF
FAATIESKAKLVYDEVSDWLENTGSWQPANDAIAAQIRLLHRVSQLRSQWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHLGFD
PANSEQLAAMLKTHGMHVDAEEVLTLEGFCKLRRELDAQPSGFLDSRIRRFQSFAEISVA
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGETPKRPQDETTVQMAERRRLNRM
AERDVGDWLYARFLQNKAGTETRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFIHAVRDE
LVCSQENGTVQIKGETAFKVTDVIDVTIAEVRMETRSIIARPAL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaacttcattcccagacaccg
cgcgcggaaggtgttgtaaaaggcacggaaaaaggcttcggatttctggaagtcgatgcg
caaaaaagctacttcattccgccgccgcagatgaagaaagtgatgcacggcgacaaaatc
atcgccgtcattcacagcgacaaagatcgcgaaagcgcagaacctgaagagctggtcgag
ccgtttctgacccgttttgtcggtaaagtgcagaagaaagacgatcgtctttccatcgta
ccggatcatccgttgctaaaagacgccattccctgccgcgcggctcgcggtgtggaacat
gattttaaagaaggcgactgggccgttgcggaaatgcgtcgccatccactcaaaggcgat
cgcggcttctatgccgaactgacgcagtttattacctttgcggaagaccattttgttccg
tggtgggtcaccctggcgcgccataatctggaaaaagaagcgccggacggcgtggcgacg
gaaatgcttgatgatggtctgcaacgcgtcgatctgaccgcgctggatttcgtcaccatc
gacagcgccagcacggaagatatggacgatgcgctgtttgtggaagagaccgccgacggc
aagctgcaactgaccgttgctatcgccgatcctactgcgtggattgctgaaggcagcaag
ctggatgattccgccaaagtgcgcgcgttcaccaactatctgccgggctttaatatcccg
atgctgccgcgcgaactctctgacgatctctgctccctgcgcgcgaacgaaattcgccct
gcgctggtttgccgcatgacgctggatgacgaaggtagcatcgaagagaatatcgaattc
tttgccgccaccatcgaatcgaaagccaaactggtttacgacgaagtgtccgactggctg
gaaaataccggttcatggcaaccggcgaatgacgcgattgccgcgcagatccgtctgttg
catcgcgtaagccagcttcgttcgcagtggcgtcagacccacgcgctggtgttcaaagat
cgcccggattatcgctttgtgctgggtgaaaaaggtgaagtgctggatatcgtggccgaa
ccgcgccgcattgcgaaccgcattgttgaagaagcaatgattgctgccaatatctgcgcc
gcccgcgttctgcgtgacaagctgggcttcggtatttataacgtgcatctcggttttgac
ccggcgaacagcgagcaactggccgctatgctgaaaacccatggcatgcatgtcgatgcg
gaagaagtgctgacgctggaaggtttctgcaaactgcgtcgtgaactggatgcccaaccg
tccggcttcctcgacagccgtattcgccgcttccagtcgtttgccgagatcagcgtggca
ccaggcccgcacttcggtcttggcctcgaagcgtatgctacctggacttcaccgatccgt
aagtatggcgatatggttaaccatcgtctgctgaaagcgattattaaaggtgaaacgccg
aagcgtccgcaggacgaaactaccgtgcagatggctgaacgtcgccgtctgaatcgcatg
gcggaacgcgatgttggtgactggctgtacgcccgtttcctgcagaacaaagccggtacg
gaaacccgttttgcggccgagattatcgatgtcagccgtggcggtatgcgcgtgcgcctg
gtcgataacggcgcagtcgcgtttattccggcccccttcattcacgctgtgcgtgatgag
ctggtttgcagccaggaaaacggcacggtgcaaatcaaaggcgaaacagcgtttaaagtg
acggatgttattgatgtcactatcgccgaagtgcgcatggaaacccgcagcattatcgcg
cgcccggccctgtaa
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