Kosakonia sp. MUSA4: C0557_14175
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Entry
C0557_14175 CDS
T09986
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02584
Nif-specific regulatory protein
Organism
kou
Kosakonia sp. MUSA4
Pathway
kou02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C0557_14175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kou03000
]
C0557_14175
Transcription factors [BR:
kou03000
]
Prokaryotic type
Helix-turn-helix
Other families
C0557_14175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
AAA
AAA_16
GAF_3
IstB_IS21
MCM
bpMoxR
AAA_2
Parvo_NS1
Motif
Other DBs
NCBI-ProteinID:
QJT81138
LinkDB
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Position
complement(2942534..2944138)
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AA seq
534 aa
AA seq
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MRYEKTAVAANTLSPVLTGALSFSCRLGECRSELMPLLSEVSKVVSAGGSLASTLKLVLE
LMQKHLQVQRAMITLYDASCDQIFIHESYGLSPEEVEKGVYAPGEGITGKVIETRQPIIV
PHIADDPLFLNRTGSWDRQRDGQHSFICVPIIRGLKVMGTIGIERVYHNEQLRFLDLEVL
RVIAAIIAQAVELHLLERAQQKIVQTHTALHGGEKFKPTNIIGNSRTMQQVYRLIDKVSH
ARTTVLILGESGVGKERVATAIHQNSHCAGGPFIRFNCASLPESVIESELFGHEKGAFTG
AISRRAGRFEEADGGTLFLDEVGELSLSAQSKLLRVIQERSFERVGSNETLSVNVRILAA
THRDLSEMVGQGTFREDLYYRLNVFPITIPPLRERGSDILILADHFNARFASEQGVEVPT
IATPALNMLLSYTWPGNVRELENVMERAVLLADEGFIHSYHLPIHLQPIIDHLTEQEGLE
ARLARVEYDLITEALAKFQGNVSRAASYLNMTRRALGLRLEKYQLNYKHYRGHA
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgcgctatgaaaaaaccgccgttgcggcgaacaccctgtcgccggtgctgacaggcgcg
ctgtcattcagttgccgattgggcgagtgccgctctgaactgatgccgctgctctcggaa
gtgagcaaagtggtcagcgcaggcggcagtttagccagcacgctgaagctggtgctggag
ttgatgcaaaaacatttgcaggttcaacgggcgatgatcaccctgtatgacgccagttgc
gatcaaatttttattcatgagagctatggtttgtcgccggaagaggttgaaaagggcgtt
tatgcgccgggtgaggggatcaccggcaaagtgattgaaacacgtcagccgattatcgtg
ccgcacattgctgacgatccgttgtttttaaaccgcaccggcagttgggatcgccagcgc
gacggacaacactcctttatttgcgtgccgattattcgcgggctgaaagtgatgggcacc
attggcatcgagcgggtttatcataacgagcagctccgttttctcgatcttgaagtgtta
cgagtgattgccgccattattgcgcaggccgtggagttgcatctgctggagcgcgcgcag
cagaaaatagtgcagacgcacacggcgctacacggcggggaaaaattcaaaccgaccaat
attattggcaactcccgcaccatgcagcaggtctaccggctgattgataaagtcagccat
gcgcgtaccaccgtgttgatccttggtgaaagcggcgtcggtaaagaacgtgttgctacc
gccattcaccagaacagccactgcgcgggcgggccgtttatccgctttaactgtgcgtcg
ctgccagagagcgtgattgaaagcgaactgtttggccacgaaaagggcgcatttaccggt
gccatctcccggcgcgccgggcggttcgaagaagcggatggcgggacgttgtttcttgat
gaagtgggggagttatcgctgtctgcgcaatccaaattgttgcgggtgatccaggagcgc
agtttcgagcgggtaggcagcaatgaaaccctgagcgtcaatgtgcgcattcttgcggca
acgcaccgggatttgagtgaaatggtcgggcagggcacctttcgtgaggatctctactat
cgcttaaatgtgtttcccatcaccattcctccgctgcgcgaacggggaagcgacattttg
atccttgctgaccatttcaacgcccgctttgccagcgagcagggcgtggaagtgccgacc
attgccaccccagcattgaatatgctgcttagctatacgtggccgggcaatgtgcgcgag
ctggagaatgtgatggaacgggcggtattgctggcggatgaggggtttattcacagttat
catctacccattcatctacaacctattatcgaccatctgacggaacaggaagggctggaa
gcgcgcctggcgcgggtggaatacgatctcatcaccgaagcgctggcgaaatttcagggc
aatgtctcgcgcgcggccagctatctgaatatgacccggcgagcgctgggattacgtctg
gaaaaatatcaactcaattataaacactatcggggccacgcctga
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