Kosakonia sp. MUSA4: C0557_14535
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Entry
C0557_14535 CDS
T09986
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kou
Kosakonia sp. MUSA4
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kou03016
]
C0557_14535
Enzymes [BR:
kou01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
C0557_14535
Transfer RNA biogenesis [BR:
kou03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C0557_14535
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QJT81207
LinkDB
All DBs
Position
complement(3020602..3021729)
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AA seq
375 aa
AA seq
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MNYQMITTNDGLATLCEAASAFPAIALDTEFVRTRTYYPQLGLIQLFDGEHTALIDPLTI
TEWAPFRDLLINTQVIKYLHAGSEDLEVFLNAFGVQPQPMIDTQILAAFCGRPLSWGFAA
MVEEFTGLTIDKSESRTDWLARPLTERQCDYAAADVWYLLPIADKLMAETRAAGRLEAAL
DECRLMMQRRQEVLAPEEAWREIGNAWQLRTRQLACLRLLADWRLRKARERDLAVNFVVR
EENMWAVARYMPSSMGELDSIGLSGSEIRFHGKTLLALVAQAQELPEEELPEPLLNLMDM
PGYRKAFKAIKALVQTISESHNISVELLASRRQINQLLNWHWKLKPQNTLPELISGWRGE
LMADQLKTLLAEYPN
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaattaccagatgataacgacgaatgacggcctggctacgctgtgtgaagccgccagc
gcgttcccggccattgccctggataccgaatttgtccgtacccgtacctactatccgcaa
ctcggtctgatccagctttttgatggtgaacatacggcactgatcgatccgctgaccatt
accgagtgggcgccgtttcgcgatctgctgatcaacacgcaggtaatcaaatacctgcat
gccggcagtgaagatctggaagtgttcctcaacgcattcggcgtgcagccgcagccgatg
attgatacccagatcctcgccgcattttgcggccgtccgctgtcatggggatttgccgcg
atggtggaagagtttaccggtctgacgattgataaaagcgaatcccgcaccgactggctg
gcgcggccgctgacggagcgccagtgcgattatgccgccgctgacgtctggtatctgctg
ccgatcgccgacaagttgatggcggaaacccgcgcggccgggcggctggaagcggcgctg
gatgagtgtcgcctgatgatgcagcgtcgccaggaagtgctggccccggaagaggcgtgg
cgcgagattggcaacgcctggcagcttcgtacgcgccagctggcctgcctgcgtctgctg
gcagactggcgtctgcgtaaagcccgtgagcgcgatctggcggttaattttgtggtgcgc
gaagagaacatgtgggcggtggcgcgctatatgccttccagcatgggcgaactggacagt
atcggcctttccggcagtgagatccgtttccacggcaaaacgctgctggcgctggttgcg
caggctcaggagctgccggaagaggagttgccggagccgctgctcaatctgatggatatg
ccgggttatcgtaaagcattcaaagcgatcaaagcgctggtgcagactatcagcgaaagc
cacaatatcagcgttgagctgctggcttcccgtcggcaaattaatcagttactgaactgg
cactggaagctaaaaccgcagaatacgttgccggaattaatcagcggctggcgcggggaa
ttgatggccgatcaactgaaaacattattagcggaatacccgaattaa
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