Kosakonia sp. MUSA4: C0557_18955
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Entry
C0557_18955 CDS
T09986
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
kou
Kosakonia sp. MUSA4
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kou03009
]
C0557_18955
Enzymes [BR:
kou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C0557_18955
Ribosome biogenesis [BR:
kou03009
]
Prokaryotic type
rRNA helicases
C0557_18955
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
CMS1
Motif
Other DBs
NCBI-ProteinID:
QJT82002
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All DBs
Position
3958255..3959589
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AA seq
444 aa
AA seq
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MTVTTFSELELDDSLLDALQDKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKNFAERLLEDPVEVSATPSTRERKKIHQWYYRADDLEHKTALLI
HLLKQPEVSRSIVFVRKRERVHELAGWLREAGINNCYLEGEMVQVKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGAAISLVEAHDHLLL
GKVGRYVEEPLKARVVDELRPTTRVPSEKLKGKPSKKVLAKREEKKKEKEKEKPRVKQRH
RDTKNIGKRRKPSAASSGQQKTEE
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaacgactttttccgaactcgaacttgacgacagcctactggacgcgctccag
gataaaggctttacgcgcccaaccgctatccaggcagctgccattccgcctgcgcttgag
gggcgtgacgtccttggttctgcgcctactggtaccggtaaaacggcggcctacctgctg
ccagcgttgcaacaccttctggactttccacgtaagaaatctggtccgccgcgtattctg
atcctgacgccaacccgcgagctggcaatgcaggttgccgatcatgcccgcgaactggcg
gcgaatacccatctggatatcgcgaccattaccggcggcgtcgcctatatgaaccacgct
gaagtgttcagcgaaaatcaggatatcgtggttgctaccaccggtcgcctgctgcaatac
attaaagaagagaacttcgactgccgcgcggtagaaacgctgatcctcgatgaagccgat
cgcatgctggatatgggcttcgcgcaggatatcgagcacattgcgggtgaaactcgctgg
cgcaaacagacgatgctgttctccgcaacgcttgaaggcgacgcgatcaaaaatttcgcc
gaacgtctgctggaagatccggtcgaagtctcagccacaccgtcaacgcgcgaacgtaag
aaaatccaccagtggtactaccgcgccgacgaccttgaacacaaaaccgcgctgctgata
cacctgctgaaacagccggaagtcagccgctctatcgtcttcgtgcgtaaacgtgaacgc
gtgcatgagctggcaggctggctgcgcgaagcaggcatcaataactgctatctcgaaggc
gaaatggtacaggtgaagcgcaacgaagcgatcaaacgtctgaccgatggccgcgtcaat
gtgctgatcgccaccgatgtggctgcccgcggtatcgacattccggatgtcagccacgtc
attaacttcgatatgccgcgcagtggcgacacctacctgcaccgtattggccgcaccggc
cgcgccggtcgcaaaggagcagccatctctctggttgaagcgcacgatcacctgttgctg
ggcaaagtcggccgttacgttgaagagccgctgaaagctcgcgtcgtggacgaactgcgc
ccgacaacgcgagtgccgagcgagaagctgaaaggcaagccgtcgaaaaaagtgctggcc
aaacgcgaagagaagaaaaaagagaaagaaaaagagaagccgcgcgtgaagcaacgccat
cgcgataccaaaaacatcggtaagcgacgcaagcccagcgctgcaagcagcgggcagcaa
aaaacagaagagtaa
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