Kosakonia sp. MUSA4: C0557_27360
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Entry
C0557_27360 CDS
T09986
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kou
Kosakonia sp. MUSA4
Pathway
kou03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kou00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C0557_27360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kou03019
]
C0557_27360
03400 DNA repair and recombination proteins [BR:
kou03400
]
C0557_27360
Enzymes [BR:
kou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C0557_27360
Messenger RNA biogenesis [BR:
kou03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C0557_27360
DNA repair and recombination proteins [BR:
kou03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C0557_27360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QJT83550
LinkDB
All DBs
Position
5654482..5656308
Genome browser
AA seq
608 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQQDIIDTVLRGRDCLVVMPTGGGKSLCYQIP
ALVLQGLTVVVSPLISLMKDQVDQLLANGVAAACLNSTQSREQQFEVINGCRNGQIRLLY
IAPERLMLDNFLDQLRQWNPVLLAVDEAHCISQWGHDFRPEYAALGHLRQMLPSVPFMAL
TATADDTTRRDIERLLGLNDPLIQVSSFDRPNIRYMLMEKFKPLDQLLRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGFSAAAYHAGLDNELRARVQEQFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGPL
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPRQYDGLQDAQKAL
SAIYRVNQRFGMGYVVEVLRGANNQRIREFGHDKLPVYGIGREQSHEHWVSVIRQLIHMG
FATQNIAQHSALQLTEAARPLLRGEVPLMLAVPRMVALKPKVMQKAAVGNYDRKLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPLSPGEMLSVNGVGTRKLERFGQEFMALIR
AHVDGDEE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcaggcggaagtattgaatcaggaatcgctggctaaacaggtcttgcaggagacc
ttcggctaccagcaattccgcccgggccagcaggatattatcgacaccgtactgcgcggc
cgcgactgtctggtggtgatgccgaccggcggcggaaaatccctgtgctatcaaattccg
gcgctggtgttgcaggggctgacggtggtggtttcgccgttgatctcactgatgaaagat
caggtcgatcagctacttgccaacggcgttgcggcggcgtgcctgaactcaacccaaagc
cgtgagcagcagtttgaggtgatcaacggctgtcgcaacgggcagatccgtctgctttat
atcgcgcccgagcgcctgatgctcgacaacttccttgatcagttgcgccagtggaacccg
gtgctgttggccgttgacgaagcgcactgcatttcccagtggggtcacgatttccgcccg
gaatacgccgcacttggccacctgcgccagatgctgccgtccgtgccttttatggcgctg
accgcgacggctgatgacaccacgcgacgcgatatcgaacgcctgctgggcttaaacgat
ccgctgatccaggtcagcagcttcgaccgtccgaacatccgctatatgctgatggaaaaa
tttaaaccgctcgatcagttgctgcgttacgtacaggagcagcgcggtaaatccggcatt
atttattgcaacagccgcgccaaggtggaagacaccgctgcgcgtctgcaaagccgtggt
ttcagcgcggcggcgtatcatgccgggctggataacgagctgcgcgcgcgggtgcaggag
cagttccagcgcgacgatttacaaatcgtggtggcaaccgtggcgttcggcatgggcatt
aacaagcccaacgtccgtttcgtggtgcatttcgacatcccacgtaatatcgaatcctat
tatcaggagactggccgcgccgggcgtgacggcctgcctgcggaagcgatgctgttttac
gatccggcggatatggcgtggttgcgccgttgtctggaagagaaaccggccgggccattg
caggatattgagcggcacaagctcaatgcgatgggggcatttgctgaagcgcaaacctgt
cgtcgtctggtactgctcaactatttcggcgaagggcggcaggagccctgcggcaactgc
gacatttgcctcgatccgccgcgccagtacgatggtttacaggacgcgcaaaaagcgctg
tcggccatctatcgcgtcaatcagcgtttcggtatggggtatgtggtggaagtgctgcgc
ggcgcgaacaatcaacgtatccgcgagttcggccacgataaattaccggtgtacggcatt
ggccgcgagcagagccatgaacactgggtgagcgtgatccgccagcttatccatatggga
tttgccacccagaatattgcccagcattctgcgcttcagctaacggaagcggcgcgtccg
ttgctgcgtggtgaagtaccgctgatgctggcggtgccgcgaatggtggcgctgaaacca
aaagtgatgcaaaaagccgccgtcggcaattacgatcgcaagctgttcgccaagctgcgt
aaattacgaaaagcgattgccgacgaagagaatatcccgccttatgtggtgttcaacgat
gcgacgctgatcgagatggccgagcaaatgccgctttcgccgggggaaatgctcagcgtg
aacggcgtgggaacacgcaaacttgagcgtttcggccaggaatttatggcgcttatccgc
gcgcatgtcgacggcgacgaagagtag
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