Kovacikia minuta: K9N68_15845
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Entry
K9N68_15845 CDS
T07518
Name
(GenBank) DNA-directed RNA polymerase subunit gamma
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kov
Kovacikia minuta
Pathway
kov03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kov00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K9N68_15845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kov03021
]
K9N68_15845
03400 DNA repair and recombination proteins [BR:
kov03400
]
K9N68_15845
Enzymes [BR:
kov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K9N68_15845
Transcription machinery [BR:
kov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K9N68_15845
DNA repair and recombination proteins [BR:
kov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K9N68_15845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
ACBP4_C
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
UBF29174
LinkDB
All DBs
Position
3335682..3337556
Genome browser
AA seq
624 aa
AA seq
DB search
MPKLEQRFDYVKIGLASPERIRQWGERTLPNGQVVGEVTKPETINYRTLKPEMDGLFCER
IFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKGI
PSYMAILLDMPLRDVEQIVYFNAYVVLNPGNCEGLTYKQLLTEDQWIEIEDQLYSEDSQL
RDVEVGIGAEALQRLLQDIDLEKEAEQLREEIANSKGQKRAKLIKRLRVIDNFIATGSKP
DWMVLSVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVRN
EKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRSV
IVVGPKLKIHQCGLPREMAIELFQPFVIHRLIRQGLVNNIKAAKKLIQRNDPTVWDVLEE
VIDGHPVMLNRAPTLHRLGIQAFEPILVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLSL
EAQAEARLLMLASNNILSPATGRPIITPSQDMVLGCYYLTAENPDAAEGNHRYFSNLDDA
IIAYEQQEVDLHSYVWVRFDGEVEMDTPDEEVLEEQTSPDGTVTKIYRSRRQRWDSEGQL
ISQYVRTTPGRIIYNKTIQDALAV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagctagagcagcgatttgactatgtaaagattggtctggcatctccagaacga
attcgccagtggggagagcgaacccttcccaatgggcaggttgtgggtgaagtcactaaa
ccagaaacaattaactatcggacgttaaagccggaaatggatggcttgttctgtgaacga
atttttggtcccgctaaggactgggaatgccattgcggtaaatataaaagagtacgccac
cggggaattgtttgtgagcggtgcggggtagaggtaactgaatctcgcgtccgacgacac
cgtatgggctacatcaagttggcggctccggttgcccacgtctggtatcttaagggaatt
cccagctatatggcaattttgctcgatatgcccctgcgggacgtggagcaaattgtttac
tttaacgcctatgtggttttgaatccaggcaattgcgaggggctgacctacaaacaacta
ctgaccgaggatcagtggattgaaattgaggatcagctttatagcgaagattcccaactt
cgagatgtggaagtcgggattggggctgaagctctgcaacgtctgctgcaagatattgat
ctggaaaaagaagcggaacaactccgggaagaaattgccaattccaaggggcagaagcgg
gcgaagttgatcaaacggctacgtgtgatcgacaactttattgccacgggttctaagcca
gattggatggtgttgtcggtaattcccgtgattccccctgatctgcgaccaatggtgcag
ctagatggtggacggtttgccacctccgacttgaatgacctctatcgtcgggtgattaac
cgcaataatcgcttagcccgcttgcaggaaattctggctcctgaaattattgttcgtaac
gaaaagcggatgcttcaggaagcagtagatgccctgatcgataatggacggcgtggtcgg
acagtggttggtgccaacaatcgccctctaaaatccctctcggacatcattgaagggaag
caaggccgcttccgtcagaatcttctgggaaaacgggtggactactctggacgttctgtg
attgtggttggtcccaagctgaagattcaccagtgtggattgccgcgggaaatggcgatc
gaactcttccagccctttgtcatccatcgactcatccgccagggtttggtcaacaacatt
aaagccgctaaaaaactgattcagcgcaatgacccaacggtttgggatgtgctggaagaa
gtgattgacgggcaccccgtgatgctaaaccgggcaccgacgttgcaccgcttagggatt
caggcatttgaacccatcctggttgagggacgggcgattcaactgcacccactggtttgt
cctgcttttaacgccgactttgacggtgaccagatggcggttcacgttcccctctctctg
gaagcccaggcggaagcaagattgctaatgctggcatcgaacaacattctttctccagca
acgggacgcccaatcatcactcccagccaggatatggttttgggctgctattacctgacc
gcagaaaatccagatgccgcagagggaaaccatcgctacttctcgaatctggatgatgcc
attattgcctacgaacaacaggaagtggatctgcattcttacgtctgggtgcggtttgac
ggcgaggtggagatggacaccccggatgaggaggtgttggaagaacaaacttcccccgat
gggacggttaccaaaatctacagatcccgacggcaacggtgggattcggaagggcagttg
atttcccaatatgtccgcaccactccgggacggattatctacaacaagaccattcaagat
gccttagcagtttag
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