Kovacikia minuta: K9N68_16305
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Entry
K9N68_16305 CDS
T07518
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kov
Kovacikia minuta
Pathway
kov03420
Nucleotide excision repair
kov03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K9N68_16305
03430 Mismatch repair
K9N68_16305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kov03400
]
K9N68_16305
Enzymes [BR:
kov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K9N68_16305
DNA repair and recombination proteins [BR:
kov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K9N68_16305
MMR (mismatch excision repair)
Other MMR factors
K9N68_16305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UBF29253
LinkDB
All DBs
Position
3450693..3453047
Genome browser
AA seq
784 aa
AA seq
DB search
MSSPPFSLDQLQATLRPGQREIADWQGGPLAVAAVPGSGKSTGMAVAAAIAIARHQLNNR
RQLIVVTFTRSAAANIKAKIRGYLRQLSLPPGGFTVQTLHGLAWAIARAHPELSGLNQDS
VLVTLNQSHRLIRTCVEQWISANSRHYQRLIEGRQFDGEETERLRRQTVLRTELLPALAS
TVIHEAKSSGLLPADLRRQSQEMSDPYAVLAIAAGLYEFYQTQLQFRNLIDYDEMILGAL
RVLEDPAVRQYWQNQVFAVFEDEAQDSSPLQTRLLEILAVDPTVPNQQNLVRVGDPNQAI
NSTFTPADPIYFREFCEVCRNQNCLASMTQAGRSTRPIIDAANFVLRWVNGVYGGQKAEG
RGQMADGEDGENAIQNSKFKIQNFSSSPIPHPSSLPETPFSSQMIHPVSAGDPQPDANPI
AEGRGLELYTPEDVYQTVEWIGQRAIALFQKNPQGSAAVLVRTNEQGRFVARELYRWHLD
TLPVYEVGQRDRQSHVPAELLTLLQFCDRPHSPDYLKAALTTLVGRKLIPTQDLNALVSF
PEQFLYPGPLDPPQSDLVAQARHYCTSLLRARLELPPRQLIPFLALTLDYDQTELATADK
LAERVAQQALGENTLPAILSILAEIVTAEQFEPVEAEDGEERYTRPGQLTVITMHKAKGL
DWDYVFVPFLHENMIPGTQWIPPQMQFLGDFTLAEVARAQIRAYLHNQFPLPDIETAWER
AKTLKTAEEFRLLYVAMTRAKRLLWMSAAAKAPFTWNKPENLDERNPCPVFPALQAQFPD
SICL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccctcccttctcactcgatcaacttcaagccacgttgcgtccagggcagcga
gaaattgccgactggcaggggggtcccttagcagtagccgcggtgccagggtcagggaag
tctacgggaatggcggtggcagcggcgatcgcgattgctcgacatcagctgaacaaccgt
cgccaattaatagtggtgacgtttacccgatcggcagcagcaaatatcaaagctaaaatt
cggggatatttgaggcagttgtccctgccaccggggggctttacggtccaaacgctgcac
gggctggcatgggcgatcgcccgtgcccatccggagttgtcgggtttaaaccaggacagt
gtgctggtgacccttaaccagagccatcgcctgattcgcacctgcgtcgagcagtggatt
tcggcaaactcccgccactatcagagattgattgaaggacgccagtttgatggcgaggaa
acagaacggttgcgccgccagaccgtattaagaactgaactattgcctgccctagcatcg
actgtcattcatgaggcaaaaagttccgggttattaccagcggatctgcgtcggcaaagt
caggaaatgtccgatccctatgcggtattggcgatcgcagctggattgtacgagttttac
cagacccaactccaattccgaaatctgatcgattatgacgagatgattctcggtgcgttg
cgtgtgctggaagacccggcggtgcgccagtactggcagaaccaggtgtttgccgtgttt
gaagatgaggcgcaggactccagcccattgcaaacccggctcctggaaatcctggcggtt
gatcccactgttcccaatcaacaaaatctggtccgagtcggagatccgaatcaggcaatt
aactccacctttactccagcagacccgatttattttcgagagttctgtgaagtgtgtcga
aaccagaactgcttagccagcatgacccaggcgggacgcagtactcgcccgatcattgat
gcggcaaactttgtgcttcggtgggtcaatggggtgtacggagggcagaaggcagaaggc
agagggcagatggcagatggggaggatggggagaatgcaattcaaaattcaaaattcaaa
attcaaaatttttcctcatcccccatcccccatccctcatcccttccagaaacgcccttc
agttcccagatgattcatccggtatctgcgggagatccgcaaccggatgcaaacccgatc
gccgaggggcggggattggaactgtatacgccagaggatgtttaccagacggtagaatgg
atcgggcagcgagcaattgccctgtttcagaaaaatccgcagggatcggctgccgtgctg
gtgcgaaccaatgaacagggcagattcgttgccagggaattgtatcgctggcacctggac
acactgcctgtgtatgaggtggggcagcgcgatcggcaatcccatgtgcctgccgagttg
ctgaccctgcttcagttttgcgatcgtccccactcgcctgactacctgaaggctgcactc
acaaccctggtcgggcgcaagctcattcccacccaggatttgaatgccctggtcagcttt
ccagagcaattcctctaccccggaccgcttgacccaccccaatctgatctcgttgcccag
gcgcggcactactgcaccagcctcctgcgtgcccgcctggaattgcctcctcgccaattg
attccgtttcttgcccttaccctggactacgaccagacggaattggcaacggctgataag
ttggcagagcgagttgcccagcaggctttaggagagaataccctgcctgccattctgagt
atactggctgaaattgttacggctgagcagtttgaacccgttgaggcggaggacggcgaa
gaacgctatacccgtcctgggcaactgacggtgattaccatgcacaaagccaagggcttg
gattgggattatgtcttcgttcccttcctgcacgaaaatatgattccgggaacccagtgg
attccgccccagatgcaatttttgggagactttaccctggcggaagttgcccgtgcccag
attcgcgcttacctgcacaaccagttcccgttacccgatatcgaaacagcctgggaacgg
gcaaaaaccctaaaaacagcggaagaatttcgcctgctctatgtcgccatgacacgagcc
aaacgattgctctggatgtctgcggcagcaaaagcacccttcacctggaataaacctgaa
aacctggatgaacgcaatccctgtccagtttttccagccttgcaagcacagtttccagat
tctatctgtctctaa
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