Kovacikia minuta: K9N68_20750
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Entry
K9N68_20750 CDS
T07518
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
kov
Kovacikia minuta
Pathway
kov00550
Peptidoglycan biosynthesis
kov01100
Metabolic pathways
kov01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
kov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K9N68_20750 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K9N68_20750 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kov01011
]
K9N68_20750 (mrdA)
Enzymes [BR:
kov01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K9N68_20750 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
kov01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K9N68_20750 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Big-like
Motif
Other DBs
NCBI-ProteinID:
UBF24143
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Position
4412770..4414587
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AA seq
605 aa
AA seq
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MTPIQPSSISHQATPRTVGRRYQSLVVMLTISLLLLGGIVARLIHLQLIEGERNRQLADN
NRIRLIPKQPERGKILDRKGKLLAVSRLSHSVFLWPLARKKTEWTTTSKRLSQILNIPET
DIQKRLEQAGYNSPFLIRIARSISPVQVTALAEYSNELEGVQVEPEAVRYYPNGDLAAHI
LGYTGEMSDRDLDQHKGEGYRLGDVIGQMGIESAYEKLLRGEWGGQQVEVDGAGQVVKVL
GRKPTRAGQDVTLTLDLDLQKAAEAALGDRKGAIVAIDPNNGAVLAMVSRPAFDPNLFSA
RISDAQWKQLQSEDHPFVNRALQGFPPASTFKIVTTTAGLESGKFSPDTVLQTYPSITVG
GIEFGDWNRAGFGPLDFVGAMAWSSDTFFYQIGMGVGDKTLIQWTRRYGFGHKTGIELSG
EEFAGLVPDDAWKQKQLGEGWFLGDTVNMSIGQGFLQTSPLQVAVMFAVPANGGYRVKPH
LLKDNESSQKWRESLNLKPETVRISQQGLRAVVSGGTGTAVNSPNLPLVAGKSGTAEDFG
RKTHTWFGAYAPADKPQIVVVAFGENSGGGGGSVAAPMVRQVLEAYFNPKKKSTQPAGVE
HVLTD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgattcagccttcttctatctctcatcaagccacgccacgaactgttgggcga
cggtatcagtcgcttgttgtgatgttgacgatttctctcctgttactaggagggattgtt
gcccggttgatccacttgcaactgatagagggtgaaagaaatcgccaattagcagataat
aatcgcattcggctgattccaaagcaaccagaaagaggcaagattctcgatcgcaaggga
aaactcctggcggtgagtcgtctttcccattcggtctttctctggcccctggcacggaag
aaaacggagtggacaaccacgtcaaaacgtctctcccaaatcctgaatattccagaaacc
gatattcagaagcggttggaacaggcaggctataattcccctttcctgattcggattgcc
cgtagcatcagtccggttcaggtcactgcattggctgaatacagcaacgaactggaaggg
gttcaggttgaaccggaggcagtgcggtattaccccaatggtgacctggcagcccatatt
ttgggctatacgggggagatgagcgatcgggatctggatcagcacaaaggcgaaggatac
cgtctgggggatgtcattggtcagatgggaattgagtctgcctatgaaaagttgctgcgg
ggcgaatggggcgggcagcaggttgaagtcgatggggcagggcaggttgtcaaagttctg
ggacggaaaccgacccgggctggacaggatgtaactttaacgctggatttagatttgcaa
aaggcagcagaagcagccctgggcgatcgcaagggggcgattgtggcgatcgatcctaac
aatggcgcagttctggcaatggtcagtcgccccgcttttgaccccaatctgttttctgct
cgcattagcgatgcccagtggaaacaattgcagagcgaagatcatccctttgtgaatcgg
gcgcttcaggggtttcccccggccagtacctttaagattgtgaccacgaccgcaggattg
gaatctggcaaatttagccctgatacggttttacagacctacccttcaattacggtgggt
ggaattgagtttggcgactggaaccgggcaggattcggccccttagactttgtcggtgcg
atggcatggagtagtgatacgttcttctaccagatcgggatgggagttggtgataaaacg
ctgattcaatggactcgtcgctatggatttgggcataaaacaggcatcgagctgtcggga
gaggaatttgctggccttgtgcctgatgatgcctggaaacaaaaacagcttggagaaggc
tggtttctgggggatacggtcaatatgtcgatcggacagggttttttgcaaacttcgccg
cttcaggttgcagtcatgtttgcggtgcctgccaatgggggctatcgagttaaaccacac
ctgctgaaagataatgagagttcccagaaatggcgcgagtcgctaaatttgaaaccggag
acggtgcgaatttcacagcaaggtttgcgggcggttgtttcggggggtacaggaaccgca
gtcaatagtcccaatcttcctctggttgccggtaagagtggtacagcagaagactttggg
cgtaaaactcacacctggtttggagcctatgctccggcagataagcctcagattgttgtg
gttgcctttggggaaaactcaggaggtggaggtggttcggttgcggctccaatggtgcgt
caggttttggaagcctatttcaatcctaagaaaaagtctacgcaacccgccggagttgag
catgtattaacagactaa
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