Kovacikia minuta: K9N68_27340
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Entry
K9N68_27340 CDS
T07518
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
kov
Kovacikia minuta
Brite
KEGG Orthology (KO) [BR:
kov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kov03016
]
K9N68_27340
Enzymes [BR:
kov01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
K9N68_27340
Transfer RNA biogenesis [BR:
kov03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
K9N68_27340
Prokaryotic type
K9N68_27340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
UBF25289
LinkDB
All DBs
Position
complement(5842362..5843315)
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AA seq
317 aa
AA seq
DB search
MQITFLGTSSGVPTRIRNVSGVALRLPQKAEFWLFDCGEGTQHQILRSDLKVSQLTRIFI
THMHGDHIFGLMGLLASCGLAGNPQRIDIYGPPDLEDYLKACRRYSQTHFSYPVKVHLVR
PGVIYEDSEFAVSCAPLKHRVPAFGYRVTEKDRPGHFDVQRAEALGIPSGPIYGRLKRGE
VIVLPDGRQVNGADLCGPTQIGRKLVYCTDTIYCDSAVELAQDADLLIHEATFAHQDAEL
AYQRLHSTSTMAAQVALTAQVQQLILTHFSPRYAPGNSLEVKDLLSEARAIFPDTELASD
FWSYEIPRRQPAKLVKV
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
ttgcagattacttttttaggaacgagttctggggtgccaacgcgaatccgtaatgtttct
ggagttgcgttacggttgcctcagaaagcagagttttggctatttgactgcggtgaggga
actcaacatcagattcttcgcagcgatttaaaggtgagccagcttacgcgcattttcatc
acccatatgcatggggatcatatttttgggctgatgggtttgctggcaagctgtggatta
gcgggtaatcctcagcggattgacatttatggtcctcctgatctggaagactatctcaag
gcatgccgccgatattctcagacccacttttcctatccggttaaggttcacctcgttcgc
cctggagtgatttatgaagattcagaatttgcagtcagttgtgcgccgctgaaacatcga
gttccagcttttggttatcgggttactgaaaaggatcgaccggggcacttcgatgtacaa
cgggcagaagcgctgggaattccgtcgggtcctatctatggcaggttaaagcgaggtgag
gtgattgtcttacccgatggcaggcaggtgaatggggcggatttatgcggtccgacgcag
attggacggaaactggtttactgcaccgacaccatttattgcgattcagcggtggagttg
gcacaggatgcggatctgctaattcatgaagcaacctttgcccaccaagatgcagagctg
gcgtatcaacgcttgcactcgacttctacaatggcagcgcaagtagccctgacagctcag
gtgcagcaattgatcttgacccatttcagcccccgttatgctcctggaaattctctagaa
gtaaaggatctattgtctgaagcccgcgcaatttttccggatacggaattagcgtccgat
ttttggagctacgagattccccgcaggcagcctgcaaagttagtgaaagtgtag
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