Kovacikia minuta: K9N68_30580
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Entry
K9N68_30580 CDS
T07518
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kov
Kovacikia minuta
Pathway
kov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K9N68_30580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kov03019
]
K9N68_30580
03400 DNA repair and recombination proteins [BR:
kov03400
]
K9N68_30580
Enzymes [BR:
kov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K9N68_30580
Messenger RNA biogenesis [BR:
kov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
K9N68_30580
DNA repair and recombination proteins [BR:
kov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
K9N68_30580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Sulfatase
Motif
Other DBs
NCBI-ProteinID:
UBF25842
LinkDB
All DBs
Position
complement(6590277..6591764)
Genome browser
AA seq
495 aa
AA seq
DB search
MQQPAQTEIAIRAKLQQIWGYQNFRPPQGEIVDCLLNQRDALIIMPTGGGKSICFQLPAL
LQTGLTLVVSPLVALMENQVQELHQRDPAFQRSVALLHSELSGWQRKQILRSLEQQKLRL
LYLSPETLLSQPVWERLCQPDLQINGLILDEAHCLSQWGDTFRPAYYRLGAVRSALLKNK
PEGSRIAIAAFTATADSSAQQTIQRILQLQEPEVFRLNPYRSNLALSVQVVWTPRGRRQQ
LLQFIQTKPNQSGLVYVRTRRDSEALSAWLTQQGYRTAPYHAGLSPDQRRQIEQAWIGDA
IQFVVCTCAFGMGINKSNVRWVIHFHAPSLLSEYVQEVGRAGRDGKPAVALTLMSETTGW
LDSEDKQRWQFFETQAQKQQQIAQQLAKKLPAEGEVGAIARQYQEGALALSWLHGSGQLR
WQDPFHYSLLPKAAKSLLGESNKRAVRQMPQYLKTRNCRWKFLLTAFGFPDEASDLHCGH
CDNCNRTRTNKIGDL
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaacctgcgcaaaccgaaattgcaattcgggctaaactccagcagatatggggt
tatcagaatttccgtccccctcagggagaaattgttgattgcttgctaaaccagcgggat
gccttgatcatcatgccgaccgggggtggcaagtccatctgttttcaactgcccgcattg
ctgcaaacggggctgacactggtcgtctccccactggtggcgttgatggaaaatcaggtg
caggaattgcatcaaagagatcccgcgttccagcgttcagtcgcattgctgcacagcgaa
ctatcgggttggcagcgtaaacaaatcctgagatcgctggaacagcagaaattacggttg
ctttacctgtctcccgaaacactcctgagccaacccgtatgggaacggctctgtcaaccc
gatctccagatcaacgggttgattctggatgaagcgcattgtttgtcccaatggggggac
acgtttcgacctgcctattaccgcctgggagccgtgcgatcggcactattgaaaaataaa
cctgaaggaagccgaatcgcgatcgcggccttcaccgccaccgctgactcctctgctcag
caaaccattcaacgaattctgcaacttcaggaaccagaagtctttcgtctcaatccctac
cgttctaatctggctctgagtgttcaggttgtgtggactccccgtggaagacggcagcaa
ttgcttcaattcattcagactaagcccaaccagtcggggttggtttacgttcgcacccgt
cgggatagtgaagcgctgagcgcctggctgacgcaacagggctaccgaaccgcaccttat
catgccgggttgagtcccgaccagcgtcgccagatcgagcaagcctggattggggatgcc
attcagtttgtcgtctgcacctgtgctttcggtatggggattaacaaatccaatgtgcgt
tgggtgattcactttcatgcgccgtctctattatcggagtatgtccaggaggttgggcgg
gcaggcagagacggaaaacccgctgttgcattgacgctaatgagtgaaacaactggctgg
cttgattcagaagacaagcagcggtggcagttttttgagacacaagcccagaagcaacag
cagattgcccagcaattggcaaagaagcttcctgccgagggtgaggttggggcgatcgcc
cgtcaataccaggaaggcgcgctggcactttcctggctgcatggatcggggcagctccgc
tggcaagatccattccattacagtttgcttccgaaagcagcgaaatcattgctgggggaa
tcgaacaaaagagcagttcggcaaatgccccagtatctcaaaacccgtaattgccgctgg
aagtttttgctcactgcctttggttttccagatgaggcaagtgacttgcattgcgggcac
tgtgacaactgcaaccgaacaagaacaaataaaatcggtgatttgtag
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