Klebsiella michiganensis KCTC 1686: KOX_03630
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Entry
KOX_03630 CDS
T01681
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kox
Klebsiella michiganensis KCTC 1686
Pathway
kox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KOX_03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kox03019
]
KOX_03630
03009 Ribosome biogenesis [BR:
kox03009
]
KOX_03630
Enzymes [BR:
kox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KOX_03630
Messenger RNA biogenesis [BR:
kox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KOX_03630
Ribosome biogenesis [BR:
kox03009
]
Prokaryotic type
rRNA helicases
KOX_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
DRTGG
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEX02465
UniProt:
A0A0H3H8C2
LinkDB
All DBs
Position
complement(760954..762906)
Genome browser
AA seq
650 aa
AA seq
DB search
MAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKTAAF
SLPLLNNIDPELRAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDVQLR
ALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQIPEG
HQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQSYWTAYGMRKNEALVRFL
EAEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLERLKDGRLDILI
ATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLRNI
ERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQYRALLAKIQPSAEGEELD
VETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRFERRGDRNDRGPRGDRGGEERP
KRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGSHSTIELPKG
MPGEVLQHFTRTRILNKPMNMQLLGDAQPRPERSGERRGGGERREGGRSFGGGERREGRG
FGGERREGGRGEGRRFSGERREGGRAPRRDDASAPRRDDSAGRRRFGGDA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggctgaattcgaaaccacttttgcagatctgggcctgaaggctcccatccttgaagcg
cttaacgatctgggttacgaaaaaccatctccgatccaggctgagtgcattccgcatctg
ctgggcggccgcgacgttctgggtatggcccagacgggtagcggtaaaaccgcagcgttc
tctttaccgctgctgaacaacatcgatcctgagctgagagcaccgcagattctggtgctg
gcgccgacccgcgaactggcggtacaggttgctgaagcaatgacggaattctctaaacat
atgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcagctgcgc
gcgctgcgtcaggggccgcaaatcgttgtcggtaccccgggtcgtctgctggaccacctg
aaacgcggtacgctggatctctctaagctgagcggtctggttctggatgaagctgacgaa
atgctgcgcatgggcttcatcgaagacgtagaaaccattatggcgcagatcccggagggt
catcagaccgctctgttctctgccaccatgccggaagccattcgccgtattacccgccgc
tttatgaaagagccgcaggaagtgcgcatccagtcgagcgtaacaactcgcccggacatc
agccagagctactggactgcttacggtatgcgtaaaaacgaagcgctggtgcgtttcctg
gaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgaccctggaa
gtggccgaagcgctggagcgtagcggttatagcagcgctgcgctgaacggcgacatgaac
cagtccctgcgtgagcagactctggagcgtctgaaagatggtcgtctggatatcctgatt
gcaaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtggttaactac
gatatcccgatggattccgagtcttacgttcaccgtatcggccgtaccggtcgtgcgggt
cgtgctggtcgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaatatt
gaacgtacgatgaagctgaccattccggaagttgaactgccgaacgcagaactgctgggc
aaacgccgtctggaaaaattcgcggcgaaagttcagcagcagctggaaagcagcgatctg
gatcagtaccgtgcgctgctggcgaaaatccagccgtctgccgaaggcgaagagctggac
gtggaaacgctggccgccgcgctgctgaaaatggctcagggcgaacgtccgctgatcctg
ccgccggatgcgcctatgcgtcctaagcgcgagttccgcgaccgtgacgatcgtttcgaa
cgtcgcggcgaccgtaacgatcgtggcccgcgcggcgatcgcggtggcgaagaacgtccg
aagcgtgagcgtcgtgacgttggcgatatggaactgtaccgcattgaagtgggccgtgat
gacggcgttgaagttcgtcacatcgttggcgcaattgctaacgaaggcgacatcagcagc
cgttacatcggtaacatcaagctgtttggttctcactccaccatcgaactgccgaaaggc
atgccgggcgaagtgctgcagcactttacgcgtacccgcatcctgaacaagccgatgaac
atgcagctgctgggcgatgctcagccgcgtcctgaacgcagcggcgaacgtcgtggcggc
ggcgagcgtcgtgaaggcggtcgtagcttcggcggtggtgaacgtcgtgaaggccgtggt
ttcggcggtgagcgtcgcgaaggcggccgtggtgaaggtcgtcgtttcagcggcgaacgt
cgtgaaggtggccgcgcgccgcgccgcgatgatgcttcagctccgcgtcgcgatgactcc
gcaggtcgtcgtcgtttcggtggcgatgcataa
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