Klebsiella michiganensis KCTC 1686: KOX_11520
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Entry
KOX_11520 CDS
T01681
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kox
Klebsiella michiganensis KCTC 1686
Pathway
kox03030
DNA replication
kox03430
Mismatch repair
kox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KOX_11520 (dnaE)
03430 Mismatch repair
KOX_11520 (dnaE)
03440 Homologous recombination
KOX_11520 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kox03032
]
KOX_11520 (dnaE)
03400 DNA repair and recombination proteins [BR:
kox03400
]
KOX_11520 (dnaE)
Enzymes [BR:
kox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KOX_11520 (dnaE)
DNA replication proteins [BR:
kox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KOX_11520 (dnaE)
DNA repair and recombination proteins [BR:
kox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KOX_11520 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEX04030
UniProt:
A0A0H3HCB4
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All DBs
Position
2480550..2484032
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA
GIKPIVGADFHVQSDLLGDELSQLTVLAANNAGYQNLTLLISKAYQRGYGAAGPIIDRDW
LIELKEGLILLSGGRMGDVGRSLLRGNMALVDQCVDFYEQHFPDCYFLELIRTGRQDEEP
YLHAAVELAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL
EERLEFLFPDPDERAKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEGPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM
AKQRGTFEEGARKRGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgatcgatggt
ctggcgaaaaccggaccgttggtaaaaaaggcggccgcgctcggcatgcctgcgctggcg
atcactgattttaccaacctctgcgggctggtgaagttctacggagcagggcacggtgcc
ggaattaaacccatcgtcggggccgatttccacgttcagagcgatctgcttggcgatgaa
ctgagccagctgacggtactggcggcgaacaacgctggctatcaaaacctgacgctgctg
atctccaaagcctatcagcgcggctacggcgcggcaggcccgattatcgatcgcgactgg
ctgatcgaattaaaagaagggctgattttgctctccggcgggcgtatgggcgacgtgggt
cgtagcctgctgcgcggaaacatggcgctggtggatcagtgcgttgatttttatgaacaa
catttccctgattgctacttccttgagctcattcgcaccggccgtcaggatgaagagccc
tacctgcatgcagcggtagaactggcggaaacccgcggcctaccggtggtggcgaccaac
gatgttcgcttccttgagccgggcgacttcgacgcccatgaaatccgcgtggctatccac
gacggctttaccctcgacgatcccaagcgtccgcgcaactactcgccgcagcagtatatg
cgcagcgaagaggagatgtgcgagctcttttccgatattcccgaagcgctgcaaaacacc
gtggagatcgccaaacgctgtaacgtgaccgtgcgccttggcgagtacttcctgccgcag
ttcccgacgggggatatgaccaccgaagattatctggttaagaaatccaaagagggtctg
gaagagcgtctggaattcctgttccccgatccggatgagcgggctaaacgccgtcctgaa
tatgatgaacgcctggatattgagctgcaggtgattaaccagatggggttcccgggctac
ttcctgatcgttatggagtttatccagtggtcgaaggataacggcgtgccggtagggccg
ggacgtggttccggcgccggatcgctggtggcctatgcgctgaaaattaccgacctcgat
ccgctggagttcgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgccc
gacttcgacgttgacttctgtatggagaagcgcgaccaggtgattgaacacgtcgcggac
atgtacggtcgcgatgcggtctcgcagattattaccttcggcaccatggcggcgaaagcg
gttatccgcgacgttggccgcgtgctgggccacccgtacggctttgtggaccgcatttcc
aagctggtaccgcccgatccgggtatgacgctggcgaaagcgtttgaagccgagccgcag
ctgccggagatttacgaggcggacgaagaggttaaagcgctgatcgacatggcgcgtaag
ctcgaaggggttacccgtaacgccggtaaacatgcgggcggggtggtgattgcgcccacc
aaaataaccgattttgccccgctgtactgcgatgaagcgggccagcatccggttacccag
tttgataagaacgacgttgaatatgccgggctggtgaagttcgacttcctcggtctgcgt
acgctcaccatcattaactgggcgctggagatgatcaacgcccgccgcgagaagaacggc
gaggggccgctggatatcgccgctatcccgctggacgataaaaaaagcttcgacatgctg
cagcgttcggaaaccaccgccgtcttccagcttgaatcgcgcggtatgaaggatctgatc
aagcgtctgcagcctgactgctttgaagatatgatcgctctggtggccctgttccgaccg
gggccgctgcagtcgggaatggtggataactttattgaccgtaagcacggtcgcgaagag
atatcgtatccggacgtacagtggcagcacgaatgcctgaaaccggtactggagccaacc
tatggcattatcctgtaccaggaacaggtcatgcagattgcccaggagctttccggctat
accctcggcggcgcggatatgctgcgtcgtgcgatgggtaagaaaaagccggaagagatg
gccaagcagcgcggcacctttgaagaaggggcgagaaagcgcggcgttgacggcgaactg
gcaattaaaatctttgatctggtagagaagttcgccggttatggatttaacaaatcgcac
tctgccgcttatgctttagtgtcctatcagacgctgtggctgaaggcgcactatccggct
gaatttatggcggcggtaatgaccgctgatatggataacaccgagaaggtcgtcggcctg
gtggatgagtgctggcggatggggctgaaaatcctgccgccggatattaactccggcctg
taccattttcacgttaacgacgatggcgaaatcgtttatggtatcggcgccatcaaaggc
gtcggcgaaggtccgatagaagcgatcattgaagcccgtaatcagggcggctatttccgc
gaactgttcgatctctgcgcgcgtacggatattaaaaagctcaaccgccgggtgctggaa
aaactgattatgtccggggccttcgaccgcctcgggccgcatcgcgcggcgttaatgaat
tcactgggcgatgcgctaaaagccgccgatcagcacgccaaagccgaagctatcggtcag
gcggacatgttcggcgtactggcggaagagccggagcaaatcgaacagtcctacgccagc
tgccagccgtggccggaacaggtcgtgctggatggcgaaagggagaccctggggctgtat
ctgaccgggcatccgattaaccagtacttgaaagagatcgagcgctacgtaggcggcgta
cgactcaaagacatgcatccgaccgatcgtggtaaagtgaccacggcggccgggctcgtt
attgccgcgcgggtcatggtcaccaagcgcggcaatcgtatcggcatctgcacgctggat
gaccgttccgggcgtctggaggtgatgttgttcaccgacgccctggataaataccagcag
ctgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgacttcagc
ggggggcttaaaatgaccgctcgtgaagtcatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaactattccagtacacctctattatcag
agggcggatgcacgcgcgcggttgcgttttggcgcaacatggcgcgtctctccgagcgat
cgtttacttaacgatctgcgtggccttatcggctcggagcaggtggaactggagtttgac
taa
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