Klebsiella michiganensis HKOPL1: J415_05680
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Entry
J415_05680 CDS
T03188
Name
(GenBank) regulatory protein CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
koy
Klebsiella michiganensis HKOPL1
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
koy03019
]
J415_05680
Messenger RNA biogenesis [BR:
koy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
J415_05680
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
AHW86689
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All DBs
Position
1223686..1225626
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AA seq
646 aa
AA seq
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MRLTTKFSAFVTLLTSLTIFVTLIGASLSFYNGIQLKMTNRVQAVATMLDNRLVSMSFDQ
IEPQMDELMTPIDAARVDFQLNGKSVYSHSRTDNYRPLGSSNQFRDITVPSLKQPGMAIH
LVYLDPMANYFRSLHITAPLSIAIGFMVLIIFFSVRWIRRQLAGQELLELRTARILNGER
GPQVRGSVHEWPANTSSALDMLLSELQFASDQRSRMDTLIRSYVAQDSKTGLSNRLFFDN
QLSTLLEDQEKVGSYGIVMMIRLPDFDLLRDNWGRAATEEHYFTLINMLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICAFRSGQTA
AQVMEHAEAATRNAVLQGSNSWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMCRLYDGKEEVIAAEYMPMVLQFGLAEEYDRLQITRLLPFLGFWPEENL
ALQVTVESLIRPRFQRWLRDTLMQCEKSHRRRIIFELAEADVCQYIGRLQPVMRLVNALG
IRIAVVQAGLTLVGTSWIKQLDVEVIKLHSGLSRNIEKRSENQLLVQSLVEACKGMPVQV
FATGVLSRSEWQVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcgtttgtcacgttactcaccagcctgacgatcttt
gtcacgctgattggcgcttcgctgagtttttacaacggcattcagctaaaaatgaccaac
cgcgttcaggcggtggcgaccatgctggataaccgtctggtctctatgtcttttgaccag
attgaaccgcagatggatgagctgatgacgccgatcgacgcggcgcgcgttgactttcag
cttaatggcaaatcggtctatagccattcccgcaccgataactatcgtcctttaggtagc
agcaatcagtttcgcgatatcacggtaccgtcgctcaagcagcccggtatggcaatccat
ctggtgtacctggatccgatggccaattacttccgttcactgcacatcaccgcgccgctc
tccatcgccattggttttatggtgctgattatctttttttccgtgcgctggatccgtcgc
cagctggcgggccaggagctactggaactccgcactgcgcgtattcttaatggcgaacgc
ggaccgcaggtgcgagggtcggtacacgagtggccagcgaataccagtagcgcgctggat
atgctgctatccgaacttcagttcgccagcgatcagcgaagccgcatggataccctgatc
cgttcctatgtcgcgcaggattcaaaaaccgggctgagtaaccgattattttttgataat
cagctgtcgacgctgcttgaagatcaggagaaagtggggtcatacggcatcgtaatgatg
atccgcctgccggatttcgacctgctgcgcgataactgggggcgcgcagcgaccgaagag
cactactttacgctgatcaacatgctttccacttttattatgcgctaccctggcgcactg
ctggctcgctaccaccgcagcgattttgccgttctgcttccgcatcgcacgttgaaagag
gcggacagcattgccgggttactcctgaaagctatggatgccctgccgccgacgcgaatt
ctcgatcgtgacgatatgatgcatatcgggatctgcgctttccgcagcggacaaacggcg
gcccaggtaatggagcatgcggaagcggccacgcgtaatgcggtgctgcagggcagcaac
agctgggccgtctatgacgattctctgccggagaaagggcgtggcaacgtgcgctggcgt
acgcttatcgagcaaatgcttagccgcggcggcccgcgactttaccagaaacccgccgtc
actcgtgatggtcgcgtacatcatcgtgagctaatgtgccgtctttatgatggtaaggaa
gaggtgattgcggccgaatatatgccgatggtgctgcagtttggcctggcggaggagtat
gaccgtttgcaaattacgcgattgctgccgtttttaggcttttggccggaagaaaacctc
gcgctgcaggtgacggtcgagtccttgatccgccctcgattccagcgctggctgcgcgat
actttgatgcaatgcgaaaaatcgcaccgtcgacgtattatttttgaacttgcagaggcg
gatgtttgtcaatatatcggccgcctgcagccggttatgcggttggttaacgctttaggt
attcgaattgccgtggttcaggccggtttgacgctggttggaaccagctggatcaagcag
ctcgatgttgaagtgattaagctgcattcggggttatcgcgcaatatagaaaaacgcagt
gaaaatcagctgctggtgcagagcctggtagaagcctgtaaaggaatgccggttcaggtt
ttcgcaaccggggtactcagccgaagcgagtggcaggtgctgtctcaatgcggtgttacc
ggtggtcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactctgtttga
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