Klebsiella michiganensis HKOPL1: J415_22260
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Entry
J415_22260 CDS
T03188
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
koy
Klebsiella michiganensis HKOPL1
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
koy03009
]
J415_22260 (rimO)
Enzymes [BR:
koy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
J415_22260 (rimO)
Ribosome biogenesis [BR:
koy03009
]
Prokaryotic type
ribosomal protein modification factors
J415_22260 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
Methyltransf_2
CLP1_P
RNase_II_C_S1
PrmA
Motif
Other DBs
NCBI-ProteinID:
AHW89845
LinkDB
All DBs
Position
4646269..4647594
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AA seq
441 aa
AA seq
DB search
MSNVTPQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPSYDNADMVIVNTCGFIDSAV
QESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYAPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LADAGVKELLVISQDTSAYGVDVKHRSGFHNGMPVKTSMVSLCEELAKLGIWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKMMKRPGSADRQLARIKQWREVCPELTL
RSTFIVGFPGETEDDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREIMVLIDEVDEEGAIGRSMADAPEIDGAVYLNGESKVKP
GDVVRVKVEHADEYDLWGSRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtcacccctcagccgaagatcggctttgtctctctgggctgcccgaaaaac
ctcgtggactcagaacgtatcctgactgaactgcgtaccgaaggatatgacgtggttccc
tcctacgataacgctgatatggttatcgttaacacctgcggctttatcgatagcgccgtg
caggagtcgctggaagcgattggcgaagcgttgaaagaaaacggcaaagtgatcgtcacc
ggctgcctgggcgcaaaagaagatcagatccgcgaagtgcatccgaaggtgctggaaatt
accggcccgcacagctatgaacaggtgctggaacacgtccaccactacgcgccgaagcct
aaacacaacccgttcctcagcctggtgccggaacagggcgtgaagctgacgccgcgtcat
tacgcttacttaaaaatttccgaaggctgcaaccatcgctgcaccttctgcatcatcccg
tcaatgcgcggcgatctggtcagccgtccgattggcgaagtgctggcggaagccaaacgc
ctggccgacgccggcgtcaaagagctgctggtgatctctcaggacacctccgcctacggc
gttgacgtcaaacatcgcagcggtttccacaacggtatgccggtcaaaaccagtatggtt
agcctgtgcgaagagctggcgaagctcggtatctgggtgcgcctgcactacgtctatccg
tacccgcacgtcgatgatgtgatcccgctgatggcggaaggcaaaattctgccctacctc
gatattccgctgcagcacgccagcccgcgtattctcaagatgatgaagcgtccgggctcc
gccgaccgccagctggcgcgcatcaagcagtggcgcgaagtctgcccggaactcaccctg
cgctcgacctttatcgtcggcttcccgggtgaaacggaagacgatttccagatgctgctc
gacttcctgaaagaagcccgcctcgaccgcgtcggctgcttcaagtacagcccggtggaa
ggcgcgaccgccaacgaactggcggatcaggtgccggaagaggtgaaagaagagcgctgg
aaccgctttatgcagctgcagcagcagatctccgccgagcgcctgcaggagaaagtcggt
cgtgaaattatggtgctgatcgacgaagtggatgaagaaggggcaattggccgcagcatg
gccgatgcgccggaaatcgacggcgcggtctacctgaacggtgagagtaaagtcaaaccg
ggcgacgttgtgcgggtgaaagtcgaacacgccgacgaatacgatctgtggggcagccgg
gtttaa
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