Klebsiella michiganensis HKOPL1: J415_23280
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Entry
J415_23280 CDS
T03188
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
koy
Klebsiella michiganensis HKOPL1
Pathway
koy03030
DNA replication
koy03430
Mismatch repair
koy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
koy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J415_23280 (holA)
03430 Mismatch repair
J415_23280 (holA)
03440 Homologous recombination
J415_23280 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
koy03032
]
J415_23280 (holA)
03400 DNA repair and recombination proteins [BR:
koy03400
]
J415_23280 (holA)
Enzymes [BR:
koy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J415_23280 (holA)
DNA replication proteins [BR:
koy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J415_23280 (holA)
DNA repair and recombination proteins [BR:
koy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J415_23280 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DUF7316
Motif
Other DBs
NCBI-ProteinID:
AHW90047
LinkDB
All DBs
Position
4870581..4871612
Genome browser
AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLTEGLRAAYLLLGNDPLLLQESQDAIREAAAAQGFIEHHTATVDASTD
WPALFSLSQAMSLFSSRQTLLLILPDNGPNAAINEQLATLVGMLHDDLLLIVRGNKLTKA
QENAAWMTALTSRAVQVSCQTPEYAQLPRWLATRAKQNNLQLDDAASQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDAAHFTPYHWVDALLAGKSKRVLHVLQQLRLEG
SEPAILLRTLQRELLLLVNLKRQSAHTPLRSLFDKHRVWQNRRQLVSDALARLSADQLRQ
AVTLLTRAELTFKQDYGHSVWPELESLSLLLCHKALADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgattcggttgtacccggaacagctccgcgcgcagctcactgaagggctgcgcgcggcc
tatctgctgcttggcaacgatccgctgctgttgcaggaaagccaggacgccatccgcgaa
gccgcggccgcccagggctttatcgaacatcacaccgccaccgttgatgccagtaccgac
tggcctgccctgttctcgttaagtcaggccatgagcctgttttccagccgccagacgctg
ctgctcatcctgcccgataatggccctaatgcggcaattaacgaacagctcgcgacgctt
gtcggcatgctgcatgacgatttattgctcatcgttcgcggtaataagctgacgaaagcg
caggagaacgccgcgtggatgacggcgctgaccagccgggcggtgcaggtaagctgccag
acgccggaatatgcccagctgccgcgctggctcgccacgcgcgcgaagcagaataatctg
cagcttgatgacgcggccagtcagctgctgtgctactgctatgaaggtaatctgctggcg
ctggcgcaggctctggagcgtctgtcgctgctgtggccggacggtaaactgacgctgccg
cgggttgagcaggcggtgaatgatgccgcgcatttcaccccctatcactgggttgatgcg
ctgctggccgggaaaagtaagcgcgtactccacgttctgcaacagctgcgtctggaaggc
agcgagcccgccatcctgctgcgcaccctacagcgcgagctgctgctgctggtcaacctg
aagcggcagtcggcccatacgccgctgcgttcgctgtttgacaaacatcgcgtgtggcag
aaccgccgccagctggttagcgatgcgctggcccgcctcagcgccgaccagctgcgccag
gccgtcacgttgctgacccgtgccgaactcaccttcaagcaggattacgggcactccgta
tggcccgagctggaaagtctctctttattgctctgccataaagcgctggcagacgttttt
attgatggttga
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